Gene Cpin_4670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4670 
Symbol 
ID8360844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5829306 
End bp5830406 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content46% 
IMG OID644966821 
Productputative uncharacterized protein with a von Willebrand factor type A (vWA) domain 
Protein accessionYP_003124308 
Protein GI256423655 
COG category[R] General function prediction only 
COG ID[COG4867] Uncharacterized protein with a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.148283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000104665 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGGCA TACATTTTTC CAAATTTGAA CCCGATGAGC AGCAGGGAAA ATCGCCCTTT 
GAGAAGTTAC TGGATGTATT CACTCAACTG CTGACTTACA CCAGCGGAGA TGTCAGTGAA
GCATTACAAT GGCTGACCGA ACTGGACAAA GAGTACCAAC TTACCAATGA AGATTACGGC
ATCGGAGATT TTATACAGGA ACTGAGAGAA AAAGGATATA TCCGTGAAAA TGAAGAAAAC
GGAAACATCC AGATAACCGG CAAGACAGAA CAGAGTATCC GCAAAAGAGC ACTGGAAGAG
ATCTTCGGAA AACTGAAGAA ATCAAACAAC GTCGGTAATC ACAATACCCG CAAATCCGGT
CAGGGAGACG AACTGAATGC TGATAGCCGT CCTTATCAGT TTGGAGACGC ACTGGAACAG
ATCGATATGA CAGCTTCCAT CCGCAACGCC CAGATCAATC ACGGTATTGA CAGCTTCTCC
ATCCATCAGG ACGACCTGGA AATCCAGGAA ACAGACTTCA AAACCCAGAC GTCCACCGCC
CTGATGATCG ATATCTCCCA CTCCATGATC CTCTACGGCG AAGACCGTAT CACGCCGGCC
AAAAAAGTAG CCATGGCCCT TAGTGAACTT ATCACAACCC GCTACCCGAA AGACACGCTC
GACATTATTG TATTTGGTAA CGACGCCTGG CAGATAGAGA TTAAAGATCT CCCTTATCTG
CAGGTCGGCC CTTTCCATAC CAATACTGTT GCGGGTCTGG AACTGGCCAT GGATATTCTC
AGACGCAGAC GCAACCCGAA TAAACAGATC TTCATGATCA CCGACGGTAA GCCAACCTGC
CTCAAGAACG GGAAAGAGTA CTATAAAAAC AGCTTCGGAC TGGACCGCAA AATCCTCAAC
CGTACGCTCA ATCTTGCTGC TCAATGCAAG AAACTAAAAA TTCCGATCAC CACCTTTATG
GTAGCTACCG ACCCGTGGTT GCAAAAATTC GTAACAGAGT TTACAGAAAC CAACAACGGG
AAAGCCTTCT TCTCTGGTCT GGACAAACTG GGACAATTCC TTTTCTTCGA CTTCGAGAAC
GGAAAAAGAA AAATGCTTTA A
 
Protein sequence
MRGIHFSKFE PDEQQGKSPF EKLLDVFTQL LTYTSGDVSE ALQWLTELDK EYQLTNEDYG 
IGDFIQELRE KGYIRENEEN GNIQITGKTE QSIRKRALEE IFGKLKKSNN VGNHNTRKSG
QGDELNADSR PYQFGDALEQ IDMTASIRNA QINHGIDSFS IHQDDLEIQE TDFKTQTSTA
LMIDISHSMI LYGEDRITPA KKVAMALSEL ITTRYPKDTL DIIVFGNDAW QIEIKDLPYL
QVGPFHTNTV AGLELAMDIL RRRRNPNKQI FMITDGKPTC LKNGKEYYKN SFGLDRKILN
RTLNLAAQCK KLKIPITTFM VATDPWLQKF VTEFTETNNG KAFFSGLDKL GQFLFFDFEN
GKRKML