| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4640 |
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| Symbol | |
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| ID | 8360813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5793762 |
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| End bp | 5797730 |
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| Gene Length | 3969 bp |
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| Protein Length | 1322 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644966794 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124282 |
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| Protein GI | 256423629 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.963654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0174413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGC AGCTTTTCGG ACTTCAATGT TTGTGCTTTT TGATGTGTTT TGTGTTTAAT
ACATCCGCAC AGTCAAATAT TGGAGATCCA CAGTTTGACT ATTCACCGAA AACGCCAGCC
GTTGGAGCGA TGCAACAGGC GATTGATGTT CCGGTAAGTC ATTTTACAGG TTCGGGTAGT
TTTGCGATTC CACTGCATAC AGCCCGATCA AAGGATATAA CTGTACCTAT AACGATAGTA
TATCAGGCAG GTGGTATAAA AGTAGACCAG GATGCTACAA TGGTTGGTCT GGGCTGGGAG
TTTAAAGGCG GAGGAATGAT TTCGCGTACG GTTAGGGGAA ATCCTGACGA GGGTTTGATT
ACTAAAATAT GGAAGGATAC AATTGTTACA GTAGTTGGAA CCAGGCGTGA CACCACAATT
CGCTATCACA GTAAGGTGGA GGAGTATGTC GACATGAAAG GCAAACATGG TGGGTTTTAT
GTAGATAATG GCAATTCACT AGATATTCCG GTTTTATCGA CTGTTATGCA GCAACATAAT
GATGCCATTA AAAATGGACA GGTTCCCTCA CCTTCAGATA TGGACTGGAC TTTTTATGGA
CTAAATGACG CTTCCCCAGA TCTATTTTAT TATGATTTTG GGAACTACTC AGGAAAATTC
TTTTTTGGTA ATAACAGGGA GCCGGTACTT GTTCCTTATA ATAAGGATAT CAAAATCACG
CCTGTTTTCT CCCAACAAAA CCTGAATGGC TGGACTAATT ATTATTTTGA CACCTGGTCT
ATTACTACTC CTGACGGGGT TACCTATTTC TTCGGCGAAA CAGATAACTC AAAAAGTTAC
GCTACGTTTC AGGGTGGACG TCGCCCCAAT GCCTGGGCAT TGACTAAAGT AGTAAACAAT
CTCACAAAAG ACAGTGTGTT GTTTACCTAT GATAAAGCAA TTTCTTCTCA CACAGGTACT
TTTAATAAGG AGGATTTTGT GACACAACAA CAATTGGATT CATGCAACTG GCCATCTTTT
ACAAAAGCTG TTGAGGTAAA TGGTATGGAG GAGTGTCAGC TTGCTACTAT CACTACCAGA
AATGAACAAT TGAACTTTTA TTATTCTACT ACTGACAGTA ATTACTATCA TGAGCAAACA
GTTACAACGC GTTTTAACCG GCTCGATTCT TTTATTGTAA AGAACGTAAA TAGTGCTGTG
CCTTATAAAA AAATTCAATT TACATATGGC AGTTTTCTAT CTAAAAAACT TAAATTAATG
GAAGTACTGG TAATGAACTA TCAGCGTACC CAAATCATGC CTTACACTTT CAATTATTAT
GACACGGCAT TCAGAAAAGT GAGGGTAAAT TCAGATTCGA TACCATTTTT TAGCTACTAC
GCTCAGGACT ACTGGGGGTA CTACAACGAT GCACGCAATG ATCTGAAAAC GACATTGTAT
ATAAATGGTT GTAACGGTGA GGGTATGGTG TCCAGGAAGG CTGCCTGGCC ACAGATGCAA
AGAGACGCGT TGACTGAAAT ATTATATCCG ACAGGTGGAA AAGTGAGGCT CATTTATGAA
CCCCATAGCG CATCGGGTGG TAGACTTATG AACGGTTTGG TGGGAGACTA TGAGACGTTT
TTCTGCGATG CTCATCACAA TTTTTCTATT ACCGATACCA TCGGTGGATT AAGGATAAAA
AGAATTGAAC AGATTGATCC TGTTAACAAT GATACCCTGA TTAAAACATT TAAGTACAAT
ATTTTTGGAT CTGCATTGTC CTCCGGATTT TTAAACAGTA CTCCTTCAAT AGTGACCGAT
GTGAGTAATT TCCAGTATTG CGGTAATACG ATAAGTAAGC CTAAATACCT GGTCAGTACC
CAAAATCAGC AGTCTGGTGC TGGCGCGGGG CCATATATCT CCTATAAAAA TGTCAGCGTC
GCTCAGGAGC GCCGGGGTGT GCAGAATGGT AATACGCAGT ATGAATATTA TGACGATACA
AATACAGATT CATCGTTTTA TTTCAATATA TGCACGAATA CAAATTACTG TTTCCCCGGT
AGTTACGATG TATTGCCGAA CTGGCAGGTA CGTAAACCGT TTGAAAACTT ATTGGCAGGT
TCTGTTAAAA GTACAAGAAC TTATAATAGC GCGGGACAGC TATTAAAGGA GGAAAAGATG
ACCTATGAGG CTGTCAGATA TCCCGTTATG GCAAGGATAA TTGAGCTAAG CAGCTTACTA
AATACAAAGA TATGTGATCG CCCACCGCTC CCAACCTATG ATTATGGTAA TCATCCAGGT
GTTCATTACA TGAATAGACC AGAAGATTCA TATACATTCT TCAGGACGTA TGCAATTGGC
AAGATGTCGG TATTGACGCG AAAAATAACA ACAGATGTCT ATGACGTCAA TGGTAATAAG
ATGACGGATA CGACAACCTT GTACTATGAA AGCCCATATC ATATCAATCC AACGACCTCT
AAAACAATCG CAAGTAATGG TGATACGCTT CGCACTGAAA CAATTTTCTC CATGGATCTG
AAGGATGTTA ATGGAACAGA TTCGTTGGGG TTACAGATGC GCAATGCATC TTTGAATATA
CCTGTAGCTT CTTTTACGAA ACGGAATAAT CTGGTTTACA GTGGTGGATA TATTTTGTAC
AAAAGAACAT CTCCACAGGA TACTAAGAGT ATTTTAAAAA GAGAGGAATT TAAACTAACC
ACAAGTACCG GAGTGGCTCC ATTGGCACTT AACCTTAGTA GTACATATCC TAAAATACTA
AATTTTCCAT CTACGCTGTT TCAGCGGCAG GCCGCTTTGA GTTATGACAA TGATAATAAC
CCCATACAGC TGGTCACGAA AGATCAGGAG GTGCGAGGGC TTATATGGGG ATATAACAAT
ACACTGCTGA TAGCTGATGT GACAAATGTA GGCATAGGAG AGATTGCTTT CACAGGATTT
GAGGGTAGCG ATAAAGGCAA CTGGACAATA CCCTCTGCAA CGAGAAGTAA TCTGTTTTTT
ACAGGTTCGA AATCATATGT TTTGGCTGCC GGAAATATCA CTTTTAACAG GATTCCAACT
AACAAAAAAG TCGTTGTTTC CTATTGGGCA ATGGGTGGCA CTTCACAAGT TAATGGAATT
TCAGTTACAG GCGGTCCGAT GAGAAATGGC TGGACTTATT ACGAGCATCT TCTGCCTGAA
ACAACAACTA CTGTGACTGT AAGTGGCAAT GCCAACATTG ATGAACTTAG AATGTACCCA
GCAGGAAGTC TTGTAACAAC CTATAACTAT GATCCTATAT TGGGACTGAC GTCTGGTGTT
TCGCCCGACA ACCAAACAAC TTACTATGAA TACGATACAC TTTATGGGTT AACAACTACC
AGGGATGCCT ATAAAAATGT TATTAAGGAA ACAGAGTATT ACGCTGTTGG GTTTAATACC
ACAGCCCCTA TATGGCGTTC CACAGGTCAA TCAAGATGTA AGCCGTGTCC AGCAAATGCT
GCATATACGA CTGACACGCT GCAATTGTTG TATGCGGACT ATAACCCCAA AAGCACTACC
TGGAAGTCTC TAAAGTGGGA GGACGCGGGC AAGTCTACCA CTTGTCCCAT TGTAGCCGGA
TGGACTAACA CTTCAACACC AGCACGCTGC CAGTTGACAA CTGGAGGACA ACCAAATGGT
AACCAGGAGC AGGAACAGAT AGACGCAAAT CCCTGCAGTC CTACCTATAA TACCAAACGA
TGGGTGATTG TTGGTGTACC TAATACCGTT TGTGTTGCTT GTATCGGTGT TGATAAGAAG
GTAATCGGGG GTGTTTGTCA GACAGGAAAC AGGGTGAATA GTTCTTCTCA GGCTGTTTTG
CAGCCAGGTG GAGGGGTGCT GTATAAATGT ACTTATCATT TTGAATGGAG TGATTGCAGC
AAGAGTGCTG ACTTCACCGA GAATAATGCA ACACCATGTA CAATTAATTT AAGTTGTAGC
GACTGGTAA
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| Protein sequence | MRRQLFGLQC LCFLMCFVFN TSAQSNIGDP QFDYSPKTPA VGAMQQAIDV PVSHFTGSGS
FAIPLHTARS KDITVPITIV YQAGGIKVDQ DATMVGLGWE FKGGGMISRT VRGNPDEGLI
TKIWKDTIVT VVGTRRDTTI RYHSKVEEYV DMKGKHGGFY VDNGNSLDIP VLSTVMQQHN
DAIKNGQVPS PSDMDWTFYG LNDASPDLFY YDFGNYSGKF FFGNNREPVL VPYNKDIKIT
PVFSQQNLNG WTNYYFDTWS ITTPDGVTYF FGETDNSKSY ATFQGGRRPN AWALTKVVNN
LTKDSVLFTY DKAISSHTGT FNKEDFVTQQ QLDSCNWPSF TKAVEVNGME ECQLATITTR
NEQLNFYYST TDSNYYHEQT VTTRFNRLDS FIVKNVNSAV PYKKIQFTYG SFLSKKLKLM
EVLVMNYQRT QIMPYTFNYY DTAFRKVRVN SDSIPFFSYY AQDYWGYYND ARNDLKTTLY
INGCNGEGMV SRKAAWPQMQ RDALTEILYP TGGKVRLIYE PHSASGGRLM NGLVGDYETF
FCDAHHNFSI TDTIGGLRIK RIEQIDPVNN DTLIKTFKYN IFGSALSSGF LNSTPSIVTD
VSNFQYCGNT ISKPKYLVST QNQQSGAGAG PYISYKNVSV AQERRGVQNG NTQYEYYDDT
NTDSSFYFNI CTNTNYCFPG SYDVLPNWQV RKPFENLLAG SVKSTRTYNS AGQLLKEEKM
TYEAVRYPVM ARIIELSSLL NTKICDRPPL PTYDYGNHPG VHYMNRPEDS YTFFRTYAIG
KMSVLTRKIT TDVYDVNGNK MTDTTTLYYE SPYHINPTTS KTIASNGDTL RTETIFSMDL
KDVNGTDSLG LQMRNASLNI PVASFTKRNN LVYSGGYILY KRTSPQDTKS ILKREEFKLT
TSTGVAPLAL NLSSTYPKIL NFPSTLFQRQ AALSYDNDNN PIQLVTKDQE VRGLIWGYNN
TLLIADVTNV GIGEIAFTGF EGSDKGNWTI PSATRSNLFF TGSKSYVLAA GNITFNRIPT
NKKVVVSYWA MGGTSQVNGI SVTGGPMRNG WTYYEHLLPE TTTTVTVSGN ANIDELRMYP
AGSLVTTYNY DPILGLTSGV SPDNQTTYYE YDTLYGLTTT RDAYKNVIKE TEYYAVGFNT
TAPIWRSTGQ SRCKPCPANA AYTTDTLQLL YADYNPKSTT WKSLKWEDAG KSTTCPIVAG
WTNTSTPARC QLTTGGQPNG NQEQEQIDAN PCSPTYNTKR WVIVGVPNTV CVACIGVDKK
VIGGVCQTGN RVNSSSQAVL QPGGGVLYKC TYHFEWSDCS KSADFTENNA TPCTINLSCS
DW
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