| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4637 |
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| Symbol | |
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| ID | 8360810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5787682 |
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| End bp | 5790867 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966791 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003124279 |
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| Protein GI | 256423626 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0127859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0510805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAG GAAACTGGAG AGCCGCCCTG CGCAAGGGCC TCTCCACACT TCTCGTGTCC
TTATTGCTGA CCGGCGAAGG ACTGCCGGCA TTTGCCTGGT ACAATGCGAC CAACCTCTCG
CAACAGCAGG CATCCACGTT AAAAGGCATC ATCAAAAACG CAAAAGGTGA ATTCCTTGCA
GGTGTAACAG TTAAAGTCAA AGGTGCCAGT ACTGGCACTG TTTCCAGAGA GGACGGCAGT
TTTCAATTGC AGGTATCAGG AGCGGATAAA GCCGTGCTTG AGGTCAGTTA CATGGGATAC
CAGTCACAGG AAATTGCAGT CGGGGGCCGC AGTACCCTGG AGATCACCCT TGCAGAGAGC
TCCAGTGGGC TAAATGAAGT ACTGGTGATC GGATATGGCA CACAAAAAAA GGTGTCTTCC
ACAGCTGCCA TATCATCAGT AGGCGGTAAA GAACTGGCGA AAGCAACGGT TCCCAACATT
TCAAACTCAT TAGCGGGCAG AGTCGCCGGA GTAAGTATGC GACCTGATGG TGGTCAGCCG
GGCGCTGATA ATCCGGACAT TCATATCCGG GGCATCGCCA CGACCGGTAA TAACGGCGCA
CTTATCGTTG TCGATGGTAT TATCCGTAAT AATATCAACG AAATACCTGC CACTTCCATT
GCATCCGTAA CTGTGCTGAA AGATGCTGCT GCCGTCGCCC CTTATGGTCT CGGGGGCGCC
AACGGAGTAT TGCTGATCAC TACGAAAAAA GGACTGACCG GCCCGCCGCA ACTTTCTTTG
AATGCCTATT ACGGTGTGCA GACACCCACG TATTATCCTG ATATGCTGAA CGCTCAGGAC
TACATGCGTC TCCACAATGA AGCCTATCTC AATGAGAATC CAGGCGGTAC ACAATTGCCT
TACGCCCAGA GCCTGATCGA CGACTATCCG GCACTGCATG CCAAAGATCC GGACCGGTAT
CCGATCAGCA ATACGAAAGA TCTCGTGCAG CTGCACGCAC CTATGCAAAA TTACGCCCTT
CAGCTGACCG GCGGCTCACA ATCAGTGAAG TATTTCGTTG CATTGGGCTA TTTAAACCAG
ACGGGTATGT TTGATCCGGT TAAATATCAG CGGTATGACT ATACTGTCAA TTTGGATGTA
CAGGCTACAA AAACTACTAC TGTGAATGTT TCATTGATCG GTGCCTGGCA AAAGACAAGT
TCCGTGGATG CCGGCACAAC AGTCGGCAAC CTGTTCCGCA GTGGCTATAA ATTTGTCCCT
ATCGCGAACC TGCAATACAG CAATGGTCTA TGGGGCGAAT TTGCAGGAAA CTCTCCAATT
GGCGTTCTCA AGGCTGGCTA CCAGCGTGAT AACAAGAGCA CCATGCTATC AACGCTTGCC
GTCAACCAGG AACTGCCATT CATACCAGGG TTGAGTCTCA AGGCTACTTT CAGCTTCGAC
CCGATGCAAA CCACCAGTAA AGGATGGCAT ACGCCGTTTT ATTTCTACTC GCAGAATCTG
TCCACCACAC CATATAGCTA TACCAGACAG ATCTCCACTT CCGAAGGCAG TGCCGCTACA
TATACATGGC TGGAACAGGA ATATGCACAA CAGCGAACAT ATACCTACCA GGGATATCTG
AATTATAAAC GCTCATTTGG CAAACATGAT GTCACCGGGT TGCTGGTAGC AGAAGCACGA
GACAGTGACT CAAGTGCTTT CTCTGCCCGC AGAAACAATT TCGGCGTAAA TATCGATGAG
CTCAGCATGG GTAGTTCCAA TAAGAATGAC TTTGATAACA GCGGGTCTTC GTCTACCGGT
AGCCAGATCG GATTTGTATA CAGGGTCGGC TATAGTTATG CTAACAAATA CCTGGTGGAA
GCATCCGGCC GTTATGATGG CCACTATTAT TTTGCACCGG GCAAACGCTG GGGATATTTC
CCAGCATTGT CTCTTGGATG GGTGATGTCA GGTGAGCCGT TCATGCAGAG AATGCCCTTT
ATAAGTTACT TGAAACTAAG AGGATCATGG GGTAAATCGG GTAATCTTGC CGGAACATCC
TTCCAGTATT TACAGGGTTA TTCATTGTAT GGTAATGCAT ATGCCTGGGG CAATGGATCT
ATGGTACAGG GATCCTTTGT ACCCCGTGAA GCCAACCGCA ACATCACATG GGAGATCTCA
ACGAAAACAG ATATCGGGTT TGAAGCCTCA TTATGGAAAG GATTACTGGA TCTGGAAGTA
GATTATTTCC GTGAAAGAAG GACCGGGATG CTGCTGCCGC CAGCAGTAAC TATCCCCATT
GAATATGGCC TCAATCTATC GGATGAGAAC GAAGGCATCA TGCAAAACCA TGGCATCGAG
ATCACGGTGG GTACGACACA TCAATTGGCA AACGGGCTCC GTATTGGCCT GAATGGAAAT
TTCAGTTATG CACGCAATAA AATGCTACAG ATCTTTGAAA CATCCGCTAC GCGCAATAAT
CCTAACAGAA GCCGTACAGG GAGGGCCCTC GGTACGCCAT TCGGCTATCA CGCGTTGGGA
CTGTTCAGTA CTGCTGATGA TAAGAATAAT GATGGGATCA TCAATCCTGC AGACGGATAC
AATGTGGTAC AGTTTGGCAA TTTGCATCCT GGCGATATAA AATACGCCGA TCTCAACGGA
CCTGATGGAA AACCGGATGG AAAGATCGAT GCCAATGATG AAACGCATAT TGGTTATCCA
AACTATCCAT TGATCACCTA CGGGTTCACT CCATCAGCTT CCTGGAAAGG CCTGGATCTT
AGTCTGTTAT TTCAGGGTTC TTCCTTGTCC AGCTTTAACA TTGCAGGTTT CCAGACGATC
CCCTTCAATA ACAACAACAG TAATTCAGCG TATGAATACT ATGATAACCG CTGGACGCCC
GGCAATCAGC AGGCAAAGTA TCCAAGGGCT AACCAGTCTC CCTACGCCAA TAATACACAG
ACCTCCGATT TCTGGATGGC AAATACCGGA CTGCTGCGCC TGAAAACAGC GGTACTGGGT
TATACTTTAC CCGCCACGCT CACGCAACGC TGGAAGATGC AATCCCTCCG TGTATATGTA
TCAGGCCAGA ATGTATTCAC CATCAGCAAA TTGAATTTTA TGGACCCCGA AGTGGGTTAT
ACAGACGGTG AAACAGCTTA TCCTAATCAG AAAGTGTTTG TGATGGGATT GAATGTAACT
TTTTAG
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| Protein sequence | MKPGNWRAAL RKGLSTLLVS LLLTGEGLPA FAWYNATNLS QQQASTLKGI IKNAKGEFLA
GVTVKVKGAS TGTVSREDGS FQLQVSGADK AVLEVSYMGY QSQEIAVGGR STLEITLAES
SSGLNEVLVI GYGTQKKVSS TAAISSVGGK ELAKATVPNI SNSLAGRVAG VSMRPDGGQP
GADNPDIHIR GIATTGNNGA LIVVDGIIRN NINEIPATSI ASVTVLKDAA AVAPYGLGGA
NGVLLITTKK GLTGPPQLSL NAYYGVQTPT YYPDMLNAQD YMRLHNEAYL NENPGGTQLP
YAQSLIDDYP ALHAKDPDRY PISNTKDLVQ LHAPMQNYAL QLTGGSQSVK YFVALGYLNQ
TGMFDPVKYQ RYDYTVNLDV QATKTTTVNV SLIGAWQKTS SVDAGTTVGN LFRSGYKFVP
IANLQYSNGL WGEFAGNSPI GVLKAGYQRD NKSTMLSTLA VNQELPFIPG LSLKATFSFD
PMQTTSKGWH TPFYFYSQNL STTPYSYTRQ ISTSEGSAAT YTWLEQEYAQ QRTYTYQGYL
NYKRSFGKHD VTGLLVAEAR DSDSSAFSAR RNNFGVNIDE LSMGSSNKND FDNSGSSSTG
SQIGFVYRVG YSYANKYLVE ASGRYDGHYY FAPGKRWGYF PALSLGWVMS GEPFMQRMPF
ISYLKLRGSW GKSGNLAGTS FQYLQGYSLY GNAYAWGNGS MVQGSFVPRE ANRNITWEIS
TKTDIGFEAS LWKGLLDLEV DYFRERRTGM LLPPAVTIPI EYGLNLSDEN EGIMQNHGIE
ITVGTTHQLA NGLRIGLNGN FSYARNKMLQ IFETSATRNN PNRSRTGRAL GTPFGYHALG
LFSTADDKNN DGIINPADGY NVVQFGNLHP GDIKYADLNG PDGKPDGKID ANDETHIGYP
NYPLITYGFT PSASWKGLDL SLLFQGSSLS SFNIAGFQTI PFNNNNSNSA YEYYDNRWTP
GNQQAKYPRA NQSPYANNTQ TSDFWMANTG LLRLKTAVLG YTLPATLTQR WKMQSLRVYV
SGQNVFTISK LNFMDPEVGY TDGETAYPNQ KVFVMGLNVT F
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