| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4625 |
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| Symbol | |
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| ID | 8360798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5774054 |
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| End bp | 5775763 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966779 |
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| Product | leucine-rich repeat protein |
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| Protein accession | YP_003124267 |
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| Protein GI | 256423614 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCC TTCTTACAAA AGAGGCAATT CATCAGCAGT TTGATATGAA ACTTTATGAT
CCCATTAGCA GGCTGGATCA TAACAGGATC ATTTACTTTG ACGGAGATAC CACCATTAAT
GGTAATCTTA GTTCAGACTG GGCAACAACC ATACTGGAAA CATTAAATGA AGACACTGAT
CTGGGTAATG TGCTGATCAT GGTCAACGGT AATCTGACCG TAAAGGGAAA TATTAATATC
GGCGACTATC ATCCACTTTT ACTGGTATTA GGCGATGTAC ATTGCGATGT GCTGAAGAGT
GGTGACGATA CGATCCACAT TGCCGGTGAT GCACATATCA GATATGCCTT CTTTGGGAAT
TATAATGATG GCAGTATCAG AATTGAAGGA ACAACCTATG TTCCATACGT ACTGAACTCC
GATCATGATT CCAGCATAAA CCCGCGGGGC GCTATTCTTA TCAATACCTA CAGCGATCAC
AATGATTTCT TTGAGTATGA TTATACGCAG GAGGTATTGC CACAGGTAAT GGTACCTGCT
ACATTTAACG AACATAATGA GTTCGACGAG TGGCAGTTTA TTGCGCTTGT TAAAGCTGGT
CAGTCGCCTT TTGTGGAAGG GGCAAAACCG ACAAGATTAG TGCATCAGGA GGAACTGGAA
AAGCTGATTG CAGGCAATAT TGATGAAATA GTGGAGTTGG ATTTATCAGA GAAGAAAATG
AAGGTGTTTC CTACAGCTAT CACAAAGCTA AGGCACCTTA AAAAACTGAT CCTCTCAAAG
AACAATATCA GCGAAATACC CGCCGCCATT GGTGAATTGC AGCAGCTGGA AGAGCTATAT
ATGTACAATA GTGGCATTAA AACTATTCAC GAAGCCATTG GTCAATTAAA GCAACTGCGG
GTGTTGGATC TGGGGGGCAA TTACGACCTG GATGCATACC CCGATGCTAT TGGTGCATTG
AGCAATTTGC AGGTCCTGAA GAACGATTAT ATGGCAATAC CATTGCCCGA TAGTCTGGCC
AGCTTGGAAA AGCTGGAAGA ACTGAGCATG TATGGGTGTT ATAACCATGT GAATGCGCCG
GCTCCGTTCC CGGAAGTGAT AACCAGACTG AAAAACCTCA AACGATTTGA TTTCCGGGAG
AATAATATCC AGGAGCTGCC GTCAGGTCTG CTGAATGTTC AGACCTTAGA GGAGTTTCAA
TGGACGGGTA GTCGCACGCA TTCGCCCAAT TTTCCCAATT TCACCGGGTT TAAACAGCTT
AAAAAACTGG TGATCAGTAA GAAGTTCCTT GGCTGGAAAG CCGAAGTCTT TGACATCACT
ACATTAGAAC ACCTGGCAAT TGATAGAAAC AAGGAAGAGA AAGAATTCAT TACCCAGGAT
ACCCTCGACC TGATGAACGA AATGGCAGCT GATGAAAACG AAGATTTTCG CGAGCACCTG
GAATGGATTA AACAGGTCAA ACAACCGGAA TCCGGCGGAC GTTTCTCCTA TATCCTTCAT
GAAGGGATGA AGCCGGAAGA CCTGCAGGAT ATTCATAAAC TACAGCGGTT GAAATACCTT
GATCTCTCTT TTAATGGTCT GGCCTGGCTA CCTGAAACAT TCTTTGAACT GCAACACCTG
GAACACCTTA ACCTGAAGTA TAATAATTTT CCGGATGAGG TGAAAGAAAG AATCAATACC
ACATTTTCCG GTACTACAAT AAACTGGTAG
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| Protein sequence | MPVLLTKEAI HQQFDMKLYD PISRLDHNRI IYFDGDTTIN GNLSSDWATT ILETLNEDTD
LGNVLIMVNG NLTVKGNINI GDYHPLLLVL GDVHCDVLKS GDDTIHIAGD AHIRYAFFGN
YNDGSIRIEG TTYVPYVLNS DHDSSINPRG AILINTYSDH NDFFEYDYTQ EVLPQVMVPA
TFNEHNEFDE WQFIALVKAG QSPFVEGAKP TRLVHQEELE KLIAGNIDEI VELDLSEKKM
KVFPTAITKL RHLKKLILSK NNISEIPAAI GELQQLEELY MYNSGIKTIH EAIGQLKQLR
VLDLGGNYDL DAYPDAIGAL SNLQVLKNDY MAIPLPDSLA SLEKLEELSM YGCYNHVNAP
APFPEVITRL KNLKRFDFRE NNIQELPSGL LNVQTLEEFQ WTGSRTHSPN FPNFTGFKQL
KKLVISKKFL GWKAEVFDIT TLEHLAIDRN KEEKEFITQD TLDLMNEMAA DENEDFREHL
EWIKQVKQPE SGGRFSYILH EGMKPEDLQD IHKLQRLKYL DLSFNGLAWL PETFFELQHL
EHLNLKYNNF PDEVKERINT TFSGTTINW
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