Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4583 |
Symbol | |
ID | 8360756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5727360 |
End bp | 5728145 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966738 |
Product | protein of unknown function DUF980 |
Protein accession | YP_003124226 |
Protein GI | 256423573 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.24438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTATA CAATCGGTTT ATTATTATTT TGCCTGGTCA TCGTACTCTA CATGCGCCGT AAGAAGGAAA AGCAGGCAAA GGATCAGACC CTGGCAGGTA TTTATAAAAC TTTACTGAAT GACCATATCC GTTATTACCA GCTCCTGGAT GATAAAGAAA AGGGGAGGTT TGAAGCACTG GTCAATGAGT TTTTACAATA CGTGCGTATT GAAGGTGTTG GTACGGAAGT CACTGATCTG GACAAAGTGT ACGTTGCTGC GAGTGCTGTA GTCCCCATCT TTGGTTTTCC CGACTGGAAA TATCGTAATC TCACCAACGT GATACTTTAT CCGGATACCT TTGATCACAA TTTTCAGTTT GAAGGAGATG AACGGAATAT ACTGGGCATG GTAGGCTCCG GTTATATGAA CGGACAGATG TTATTGTCCA GAGCAGCTTT GACAAAGGCA TTTTCCGGCT CACCCGGTAC AGAGCATACG GCCATTCACG AATTTGTTCA TTTGCTGGAT ATGTCAGACG GTGCGACAGA TGGTATACCT GAGAATCTGA TGCGACATGA ATATACTGTA CCCTGGTTGA AAATGATGCA TGAGGAAATG CGTCGCATCG AGCAGGGACG ATCAGATATC AATCCGTATG CATTGACAAA TGAGGCGGAA TTTCTGGCAG TGGCTTCGGA GTATTTCTTT CAGAAACCGG AACGATTCAA ACAACATCAT CCTGAAATGT ATGCGCAAAT GAGCCGGATT TTTGGTCAGA AGCCACCAAC AACAACAGAT AACTGA
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Protein sequence | MFYTIGLLLF CLVIVLYMRR KKEKQAKDQT LAGIYKTLLN DHIRYYQLLD DKEKGRFEAL VNEFLQYVRI EGVGTEVTDL DKVYVAASAV VPIFGFPDWK YRNLTNVILY PDTFDHNFQF EGDERNILGM VGSGYMNGQM LLSRAALTKA FSGSPGTEHT AIHEFVHLLD MSDGATDGIP ENLMRHEYTV PWLKMMHEEM RRIEQGRSDI NPYALTNEAE FLAVASEYFF QKPERFKQHH PEMYAQMSRI FGQKPPTTTD N
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