Gene Cpin_4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4566 
Symbol 
ID8360739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5711393 
End bp5712589 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content47% 
IMG OID644966721 
Productacyltransferase 3 
Protein accessionYP_003124209 
Protein GI256423556 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.732432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.281548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGTG CCATTACTGG CAATTTGCTT GCATATGTAA CCGGGGATAA CTATCTTCCA 
CGCTTTACCT TTAGCATGCA TATGACCGAA ACAGCTACCA CGACAGCGCC AACAGGACAG
GCCGCGTTAC TACAGACCAG ACAACATTTT GAGATACTCG ACGGACTAAG AGGCGTTGCC
GCCGTGTTCG TCGTGTTCTT CCACTTTATG GAGGTGATCT TTACAGATGC CACAAAGAAT
TTTGCCGGAC ATGGATTCCT GGCGGTTGAT TTCTTCTTTT GTCTGAGCGG ATTTGTCATT
GCATATGCTT ATGACAACCG TATTGAAAAA ATGGGGACTA TGGAGTTCTT CAAATCAAGG
ATCATCCGCC TGCATCCACT AGTGGTATTG GGTACGGTAC TCGGCTTGCT GGCCTTCCTC
TTTAATCCGT TCGCGCCGGT ACCGGAGACG TATACTTTTG GGAGAATTGC ACTGATTGTG
CTGGCTTCCA TGCTCATGAT CCCTTTGCCG GTAATGGGTG AAACGTATTT CAATTTATTC
GGACTGAACG CGCCTTCCTG GTCACTTTTC TGGGAGTATA TCGCTAATAT TATTTATGGC
ACCATTCTGT GGAGATTTTC TAAGAAAGTG CTCCTGGGAT TAGCTGTCGT TGCAGCAATA
TGGCTGATCT ATACAGCATA TAAAGCCGGC AATCTTTTAG GCGGATGGTC CGGCGGCACT
TTTCCGGATG GCGGCGCCCG TCTCAGTTAC TCTTTCCTGG CTGGCCTACT GGTATACCGT
TACAATTTCA TTATCAAAAA TAAACTGGGT TTTCCGGGTA TGGCAATACT GCTGTTGCTG
GCGTTGCTGA CACCCTGCAC AAAAGAACCC TGGCTGATAG AACTGGCCCT GGTGATGGTG
TATTTCCCTT TACTGGTGGC ATTGGGCGCA GGTGCGCAGG TGAGCAACAA GGCAATACAC
AGCGTATGTG ATTTTGCCGG AAAGATCTCC TATCCGCTTT ATATGACGCA CTATATGGTG
ATCTGGATAT TTGCCGCCTA TTATAACCAA TATAAGCCTG CGCCGTCGCA GCTGGCATGG
GTCGTAGGTA TCGGCGTCGT TTCACTGATC GGATTTGCAT ATCTGGCAAT GGTACTGTAC
GATATTCCGA TACGTAAGTA TCTGACAGAG AGAAGGAAGT TAAACAGGCA GGGCTAA
 
Protein sequence
MLSAITGNLL AYVTGDNYLP RFTFSMHMTE TATTTAPTGQ AALLQTRQHF EILDGLRGVA 
AVFVVFFHFM EVIFTDATKN FAGHGFLAVD FFFCLSGFVI AYAYDNRIEK MGTMEFFKSR
IIRLHPLVVL GTVLGLLAFL FNPFAPVPET YTFGRIALIV LASMLMIPLP VMGETYFNLF
GLNAPSWSLF WEYIANIIYG TILWRFSKKV LLGLAVVAAI WLIYTAYKAG NLLGGWSGGT
FPDGGARLSY SFLAGLLVYR YNFIIKNKLG FPGMAILLLL ALLTPCTKEP WLIELALVMV
YFPLLVALGA GAQVSNKAIH SVCDFAGKIS YPLYMTHYMV IWIFAAYYNQ YKPAPSQLAW
VVGIGVVSLI GFAYLAMVLY DIPIRKYLTE RRKLNRQG