| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4544 |
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| Symbol | |
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| ID | 8360717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5669908 |
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| End bp | 5676000 |
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| Gene Length | 6093 bp |
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| Protein Length | 2030 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966699 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124187 |
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| Protein GI | 256423534 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.103918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.155132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACGC TCCAAAAGAC GTTCCGCTAT GCTGCGGACC CCTCAAAGCT GCCTTTGAGC
AGCGTACCCG TGACCATTGG TTACCCGGTA TATCAGATCA GTAAAAGTAT GCCTCCCGGC
ACTACATTTG AAATATACAT CCGGGAAGCC GTGGACAGTA ATTCTATCAG CTTTCAGCAA
CAACTGACTG CGAAAGAATA CTTTTCTCCG CTGCCGGAAG GAAGTATGTT CAGCAACAAT
TACGACCTGT TATTTCAGTA TTTCAACTTC CATTTCAACT CAGGTTTGTC CGCCAATGTA
ACGCTGGAGC AAATCAGCAG TCCCTTCCAG GTACAGTTTG CCGGTGGCAG CCAGACCAGC
ACTGTTGACG GTCTGTACTT CCTGAAAGAC CTGCTTCCCC TGCAACGTTC TGCACGACTG
GCAAGAACTG CGCCTGCGGC GGATGGAAAT GCAGAACTCT ATATCCGGAA GAACCTCTAC
ATGGTCAACA AAACCGGCTA TCTTTCCATG ATCGAACATA TCGGGGTGAG AGAGCTGGAT
CCGGGTGGAT TTTTCCTGTT GTATGTCATC AATCAGCTGA TCGATCTCAG TGGGAAATCA
CCTGTACTGA AAGCGACAAT AGACGACACT ATCAAACAAC GTATCGGTGC TATTCTGAAC
AGCTTTTCCT ATGAGAATAC AGAGGAGATC ACCAATTATG TCATTGACAA CTTCAACCTG
CTGATTGACT TCCCGATGGA TATGCCGGAG ATACAGTCAC TGGAAATAGG CGGTGATTTT
GAAATTGTTC CCGCAGATGG TACAGATACC GGTTTCACCG ACTTACTGCT GTTTGATCTT
TCTGTAGAAT ATGCCGTAAG GGAAAGCGAT ACGGTTTCTA TGGTGCAGAT ACAGCACTTT
GACTGGATGG CGCACAAAGG TGATTTCAAA GATGGTAAGA TCAAATTCAG CTTTACCAGG
GATAATCCGC TGTTGCAATC TGCTATAGAC GGCAACATTC TTATCAAGGT AAAAAACTTT
GATAAAGCGG TGATCTGGTC CAGACAATAC AAGCCGGAAG ATCCGGCGCT GGCAAAGCTG
GCAATCAGCG TTCCGCTCCA ACGTCCTAAC GTGATCACGG CAGGCGATAA AAGCGGCACA
AAAGACGATA ATAAGCGCCT GCGCGGTCAA TTGGTGGAAC TGACGAAACA GTGTCCGCTG
AAAGGGGCAA AAGTCCTTAT TCAGGCTAAA AAAGACGCAG ATAGTCTGTG GCAGATTGTA
GGCGCTGCGG AAGCAGATAG TGCCGGTAAC TTCTCGATGC CTTACCCCTA TGGCGTATTT
ACCGCCGCAC AGGCACTGGT ATCGCTGACG CCTGACAGTC CGGTAGATAT TGCAGTCAAT
CCACAATCCC AGACCAACCA GTCCATCTCC CAGGATTTCC TCTACCTGTT ACTGAAAGAT
GTTGTTTGTG AAGATGATCA TGCACATGGC GACGATGACT GCGAATGTCA TTCCGTTAAA
AAATCAGGTC GTCTGCCGGG TCAGGAAGAC CTGATCAACT CTGATCAGTA TTCACAGGAT
ATCGGAGGTT CCTGTGTGAA CCTCTCCACG CCTAACCGTA CCCTTCGCGA ATATAACTAT
TCCGCTATCG TACGTACCTC CGATCCGGAT GTAGCGAATT ACACCCTGCG GAAGTTACTC
AATGGCAAAT ATGAGCTCGC AGGCGACAAT AAAAAGATCT CCCGTGCCGG TGTGGACCTG
GATAATCCGA TCCGCTGGCA GGACGCCCCT GACGCCAAAG AAAACCTCTC TTTCTATCAG
GCAGTAACCG TCGCTACGGG ACACATTCTG CATTACAAAT CAGAGTTCAA AGCAGATGGT
TATTCTATGG GTGATCTGCT GTATTCCCTG GCACTGGCTC CTGGTCAGAA GAAGCAGATC
GTCATCATTG ATGCAGAACA TTCTCTCACC GGAGCAGAAA CACAATCGCT GGCACAGGGT
GAAAGTCTGG CGGCCAGTCT GCTGAACGAA CGTTCTATCT CCGATCAACT GGGCGGTAAC
ATCAGTGAAG CCATGAGCGG CAGAAGTTCT GCCAGCACCA GCGGTGTCAG TGCAGGTCTT
GGTGCTGCTG TAAGCTATGG CGGTATGATT GGTGCCTCCC TGGGTGTAGC AGGTGGTTAT
TCTAATTCCA ATTCATCCGC CTCACAGAAC AGTTCCCGTA ATATTTCACA GTTCTTTGGT
GAAAGACTGC GTCAGAGTAT TATGCAGAAT GCCGAAAGCT ATCGTCAGCT GAATGCATCC
GTAGTAACTT CTGTACGCGA AGGACAGACA TATGGCGCTA CCGCTGATGT AGTAGCTAAC
CATAACCACT GTCATGCGCT GACAATGATG TACTTCGAAG TACTGCGTCA TTTTGCTATC
TACCAGGAAC TGGCCAGTGT GGAAGAATGT GTGTTCGTAC CCTTACTGAT GACCAATTTC
ACCCCTGAAA ATATCAGGAA ATGGGCAGAT GTGCTGGCGA AACATCTCAA GCCGATGCCA
TCCAGTACTT ACCTCCGGCC GGCTTTGTAT TTAGGCAGAC CGCAACATCC TTTGCTGAAA
GCGTTTGATG CCAATGAAAG GATCCTGACG AATTACCAGC ATGTAGATTA TCCAACTGGT
TCTTATGACA AAGACCAGAT CCGTTTCGTA AAAGGCGAGG TGAATGCACG TGTGAACCTG
GAACGTCCGA AAACAAAATA CGACCGTATC AAGTCACTGC CTGTCATCAC CAAAACGGTA
ACCAAAGAGG TAACTGACGC CCGCAGCGTG GCAAAGAGTG CGGTATTAGG CGTGCTGACC
GGCGGTTTAT CCCTCCTGCT GGGATCTGAC GGTACCCGTA CGGAAACAGA AGAAGTAATG
GGAAAAGAAA GGATCTTCGA CGGATTCATG CACCTGGATG CCAATTACGA ATATGTCGCG
CCTGCCCGTT GTATCCGCGT GAACAATTTC CGCGACTTCA CCATCAAACT GCCATGGGGA
AATATTACCA TCGCTCCTAT CGACTTCTTC CAGGGCGCAC AGGTAGATAA AAAACTCTGG
GATGCCTATG CATCGATCCT GGGTTATACC GATACCCTGG ATATGCTGGA ATATTATTTC
AAAGGCAGGC TCATTTCAGA GTGGGATGAG ATCTATTACA ATGATATCGC ACCGGTTGTT
TTTGAGCGTA TTACCGACGC GATCCGCTTT GAAGGCATTA CTACCGATAT GAGCACGACA
GCCCGTTATA AAGGCGGAGA ACGTGTCATG CGCGTCAACT TCAACGGTAC TACCAGCAAA
CGCAGAGTAG ACTTTGGCGA TACGCTGAAA ATGTTCTGTA ACAGTCCGGC AGCCAAATCC
CTGAAAGGAC TGGTTACCCT GAACGTAGAG AATGTACGCA TCAGCTATTC TACCGATCAT
TTCAACGGTT ACCTCTACAG CGGTAATGTC GGTGATGATA TACTGGACGA TACCTTCCTG
TATATTCCGG AAAATGCGGA CGAGAAAAAA GACCCGCGTA AAGAAGACCA GTTCCTTGTA
CAGAAACTGC TGGATCACCT GAACAGCAAC CTGGAACATT ATAACAAAGC GCTGTGGTAT
AACCTGGATA CAGACCGTCG TTTTATGCTG CTGGATGGTT TCAATATCCA GATCTTTAAT
GAGTTCGGTA TACCTACCGG ATTCAGAAGT CTGGCTTCCG TAGTAAAAAA TGAACTGGTG
GGTATCGTAG GTAACTCCCT GGTATTGCCG GTAGCTCCTG GTTATAAAGT AAGCCAGTCT
TTCATTACAG AACAGACAGA CGAAGGCGTG GAACAGGAAG TAACCCTGTT CGACCACTAT
CAGCCACTGA CGCCTGTACC TCCTTACCGT GTCAGTGTAC CAACACGCGG CGTATTTATG
GAAGCCGTAC AGGGCGCTTG TGACGCCTGT GAAAAAGTGA AGGAGAACTC TTCTCAGGAC
TGGGATAAAT TCCAGACAGA ACAGCCTACA CCTATTGGTA CGATTACACC AGTGACACCG
GTAGTGACCG ACTGGAAAGC TGCCTTCAAA GATTTCGCAA CACCGATTGT CAATATCCAG
AATGCACCTG CCACACCAGA ACCAGGAGCA GGACTGGCAG GATTGTCGGA GCTGATGGGT
AAAGCGGGTA TTTTCAAAGA TATCACCGGA CTTGATGCCA ATCAGCAGAA TGCCATCAAG
ACTTACCTGT CCAACCAGGA AAATGCCAAA GCCTTTGCAG AGATGGCAAA AACGATGGCC
ATGCAGAGTC ATAACTCCGA CAACTCTTCC AAGATCATGG ATACGCTGAA AGCGGCCAAG
GATTCCGGCG CGATCAGCAA TGATGATTAT GGCAAACTGG TGAAAGAACA CTTACAGCAG
GTAATTGACG GTGGGGCTAC CAAAAAAGCT GAAATGGAAA AAGATAAGAG TGCCGCTAAA
CCTTCTTTGA CTGATGCAGC CGTAAAAGCA GCTGACCAGG GCAAGGACGT AAAAGCACAG
AAAACTGATC CGGAAGGCAA TGTGGAAAGT GTAGAGATCA CCAGCGGCGC CTCCAAAACG
GTACTGGCGG AAGTAGACGG AACTATTCCA AAACTGAAAC AGCCGAATTC CATGGCTTGC
TGGGCGACCG TTGCCACCAT GATGGTTTCC TGGAAAATGA AGCAGTCCAT GTCTATCGAA
AATGTAATGA TGCTGGCGGG CGACGAATAC CTGGAGAAAT TCAATACGAA CAAAGGACTG
AAAGCGGCGG AAAAAGAAGC CTTCCTGACC CAGCTGAATA TGGTAGGTGA AGGTCCGGCC
AGCTACCCGA TACAGCAATA CGTGAACTGG ATCAAAACGT ATGGTCCGCT GTGGATCACG
ATTGACTCCA GCGTAGCAGA AGGTCCGTTC TCTCCACATG CCCGCATCCT CTACAAAATA
GAAGGTACCG GTACTGATAA AGGCACCAAT TTCGTATTCA TTGATCCGGC TACCGGCACA
GAGAAAACGG AGACTTTCTA TGATTTCCTC GCGGCTTACG AGCAGATGGT GACTGATAAT
CCTTCTTCCA GACTGTTTAC ACAAATCGTA CATTTCAAAG ACGAGGCAGA TGCGGGTGAA
GGTTATCAGA TCCAGGACCC TTTACACATG AACAGTCCTG TTCACGAAAA AATCACCATG
GCGGCACTGG TGAATTCCAC GGCAAAACAG CCAGCAAACA CGAAAGTGGG CGTAGGTGGC
GATCACAAGG CAAATGAGAT CTTCCGTGGT ATCTTCTGGA ATGACGATCC GGCTAACCTC
CTGTTTGAAG ACAGCAAATA CTCCAGCTGG ACGGTTGCAA CCGGTCTGGT ATGGCTGATG
AAGTTCAAAG CAGCGGAAGG CGCTAGCAAA ACAGACCTGA AAAATATCAT CGGTCGCTCC
CACTTCTGGG ACCTGCAGTT CCTGCACGGC ATGGGTACAA AAAAAGGAGA AGATCCGAAG
GATACGCAAG CCAAGATCCT GCTGTGGGTA GAAACGATGT ATAAGCTGTC TATCGAGGAA
GGTATAAAAG ACGAAGATCA GCTGAAAGCC ATTCCGGTGA CTTCCAAGTT TGGTAACAAT
ACTTACCGCA TCAGTAGCTT CTTTACGTCG GATACCAGTC CGAAAGACAC AGATACGGTG
ACTAAACTGC TCAGTAATGA CAGTAACTCG ATCTTCCTTG ACAATTCAAG GAGAGCATTG
GGTTCTATTA TGCACCTGAT ACAGGACTCT TTTGCGAAAG GACATACCAA ACGTAAGCTG
AAGAATCCAG GCGATCTTAA ACCGGGTAAA ACAGATGAAT TTGTAGATGG CAAATGGGGT
GATTATGGCG AGATCGAAAA CTTCCATTGT TATGCCGGAC AGGATCATTC CGCACACGAC
AAGTATGATG ATTATGACGC GGATCTGCTG AATGTGAGCA GTCTGGAGAC CTTCAATGGA
CTGATCGGTG CACGTAACTC CGTGAACTAT TGTATCAAAC TGGTCGATTT CTGGAAAGCC
AGGGTACCTT ATAACAACGG ACCGAAAGCG ATGTTTGAAA ACGAGATTTT CAAACTGGCA
GCCAATGCGA CACCATCGGA CACCAACGTG TGA
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| Protein sequence | MLTLQKTFRY AADPSKLPLS SVPVTIGYPV YQISKSMPPG TTFEIYIREA VDSNSISFQQ
QLTAKEYFSP LPEGSMFSNN YDLLFQYFNF HFNSGLSANV TLEQISSPFQ VQFAGGSQTS
TVDGLYFLKD LLPLQRSARL ARTAPAADGN AELYIRKNLY MVNKTGYLSM IEHIGVRELD
PGGFFLLYVI NQLIDLSGKS PVLKATIDDT IKQRIGAILN SFSYENTEEI TNYVIDNFNL
LIDFPMDMPE IQSLEIGGDF EIVPADGTDT GFTDLLLFDL SVEYAVRESD TVSMVQIQHF
DWMAHKGDFK DGKIKFSFTR DNPLLQSAID GNILIKVKNF DKAVIWSRQY KPEDPALAKL
AISVPLQRPN VITAGDKSGT KDDNKRLRGQ LVELTKQCPL KGAKVLIQAK KDADSLWQIV
GAAEADSAGN FSMPYPYGVF TAAQALVSLT PDSPVDIAVN PQSQTNQSIS QDFLYLLLKD
VVCEDDHAHG DDDCECHSVK KSGRLPGQED LINSDQYSQD IGGSCVNLST PNRTLREYNY
SAIVRTSDPD VANYTLRKLL NGKYELAGDN KKISRAGVDL DNPIRWQDAP DAKENLSFYQ
AVTVATGHIL HYKSEFKADG YSMGDLLYSL ALAPGQKKQI VIIDAEHSLT GAETQSLAQG
ESLAASLLNE RSISDQLGGN ISEAMSGRSS ASTSGVSAGL GAAVSYGGMI GASLGVAGGY
SNSNSSASQN SSRNISQFFG ERLRQSIMQN AESYRQLNAS VVTSVREGQT YGATADVVAN
HNHCHALTMM YFEVLRHFAI YQELASVEEC VFVPLLMTNF TPENIRKWAD VLAKHLKPMP
SSTYLRPALY LGRPQHPLLK AFDANERILT NYQHVDYPTG SYDKDQIRFV KGEVNARVNL
ERPKTKYDRI KSLPVITKTV TKEVTDARSV AKSAVLGVLT GGLSLLLGSD GTRTETEEVM
GKERIFDGFM HLDANYEYVA PARCIRVNNF RDFTIKLPWG NITIAPIDFF QGAQVDKKLW
DAYASILGYT DTLDMLEYYF KGRLISEWDE IYYNDIAPVV FERITDAIRF EGITTDMSTT
ARYKGGERVM RVNFNGTTSK RRVDFGDTLK MFCNSPAAKS LKGLVTLNVE NVRISYSTDH
FNGYLYSGNV GDDILDDTFL YIPENADEKK DPRKEDQFLV QKLLDHLNSN LEHYNKALWY
NLDTDRRFML LDGFNIQIFN EFGIPTGFRS LASVVKNELV GIVGNSLVLP VAPGYKVSQS
FITEQTDEGV EQEVTLFDHY QPLTPVPPYR VSVPTRGVFM EAVQGACDAC EKVKENSSQD
WDKFQTEQPT PIGTITPVTP VVTDWKAAFK DFATPIVNIQ NAPATPEPGA GLAGLSELMG
KAGIFKDITG LDANQQNAIK TYLSNQENAK AFAEMAKTMA MQSHNSDNSS KIMDTLKAAK
DSGAISNDDY GKLVKEHLQQ VIDGGATKKA EMEKDKSAAK PSLTDAAVKA ADQGKDVKAQ
KTDPEGNVES VEITSGASKT VLAEVDGTIP KLKQPNSMAC WATVATMMVS WKMKQSMSIE
NVMMLAGDEY LEKFNTNKGL KAAEKEAFLT QLNMVGEGPA SYPIQQYVNW IKTYGPLWIT
IDSSVAEGPF SPHARILYKI EGTGTDKGTN FVFIDPATGT EKTETFYDFL AAYEQMVTDN
PSSRLFTQIV HFKDEADAGE GYQIQDPLHM NSPVHEKITM AALVNSTAKQ PANTKVGVGG
DHKANEIFRG IFWNDDPANL LFEDSKYSSW TVATGLVWLM KFKAAEGASK TDLKNIIGRS
HFWDLQFLHG MGTKKGEDPK DTQAKILLWV ETMYKLSIEE GIKDEDQLKA IPVTSKFGNN
TYRISSFFTS DTSPKDTDTV TKLLSNDSNS IFLDNSRRAL GSIMHLIQDS FAKGHTKRKL
KNPGDLKPGK TDEFVDGKWG DYGEIENFHC YAGQDHSAHD KYDDYDADLL NVSSLETFNG
LIGARNSVNY CIKLVDFWKA RVPYNNGPKA MFENEIFKLA ANATPSDTNV
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