Gene Cpin_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4500 
Symbol 
ID8360673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5602681 
End bp5603121 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content42% 
IMG OID644966655 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003124143 
Protein GI256423490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.833259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.818323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC AGGAATTCAG GATCATGATT AATGGTCCAC GCGAAAAGGT GTGGCAGATA 
TTGTGGGATG ACGCTTCTTA CAGGGAATGG ACATCCGTAT TTGCGCCAGG ATCATGGGCT
AAAACTGACT GGAAAAAAGG CAGTAAGGTA CTGTTCCTGG ATGCTGAAAA TTGTGGTATG
GTATCCTCCA TTGCAGAAAA CATTCCTAAC AAGTATATGT CCATAGAACA CCTGGGTTAT
GTCAAGGAAG GGAAAGAGGA TTTTGACAGT CCGGAGGTAA AACAATGGGC CGGTGCGCAT
GAAAACTATA CATTAAAGAA TGTAGATGGT CACACCGAAC TTGTGGTTGA TATGGACATT
GCAGAAAGCC ATAAGGAGTA TTTTGTAAAT ACCTGGCCGA AGGCATTGGA GAAAGTCAAA
GAATTGGCAG AAAAGAACTA A
 
Protein sequence
MEKQEFRIMI NGPREKVWQI LWDDASYREW TSVFAPGSWA KTDWKKGSKV LFLDAENCGM 
VSSIAENIPN KYMSIEHLGY VKEGKEDFDS PEVKQWAGAH ENYTLKNVDG HTELVVDMDI
AESHKEYFVN TWPKALEKVK ELAEKN