Gene Cpin_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4480 
Symbol 
ID8360653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5572154 
End bp5572849 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content47% 
IMG OID644966635 
Producthypothetical protein 
Protein accessionYP_003124123 
Protein GI256423470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.17724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.265147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGAT ATCTTTTTAC AGACTCTTTA TTATTGGGCA TACAGCACTC TTTCGAACCC 
GACCATATGG CGGCCGTATC CGTGCTGGCA TCAGAAAAAG CCAATAATAA GATCAGTCTT
TCAAAGCTGA TATGGCGCTC TTCACAATGG GCTTTAGGAC ATTCGGTTAC GCTGATACTA
TTCAGTTGCT TTGCGCTGTT ATTGAAATCT GCCTTACCGC TGGATCTTTC CGGTTATGCG
GAAATGATAG TAGGGCCGGT GATGATATGG CTGGGTATCT CTGCCATCCG CAGAAATCAT
CAGCTCAAGC AGATGATGGC CACACACAAG ACCTTTTCAG AGCATGAACA TATCAACAAT
GCCCTGCATA TCCATGGTAA ACAGGGACAG GAAATTGCGA TGAATCCATT AAGCCGTTCC
TTCTGGGTAG GGATGCTGCA TGGACTGGCC GGAACCGGTG GCGCCTGTGC CGTAGCCCTG
ATCATGGCCT CCCGTGATAC CACAACGGCT ATCGGTATCA TTGTGTTGCA AAGTATCGGC
ATTGTCGCCG CGATGACCAC TTACAGCTGT GTACTGGCAT TTTCAGTATC CCGGTTTATT
GAGCGGAACC AGCTGGCATT TAAATCACTC AACGCAGTTG TAGGACTGTT TTCCATTGGC
ATAGGCTGTC TCTGGATCTA TAACAGTTTT GCGTAA
 
Protein sequence
MIGYLFTDSL LLGIQHSFEP DHMAAVSVLA SEKANNKISL SKLIWRSSQW ALGHSVTLIL 
FSCFALLLKS ALPLDLSGYA EMIVGPVMIW LGISAIRRNH QLKQMMATHK TFSEHEHINN
ALHIHGKQGQ EIAMNPLSRS FWVGMLHGLA GTGGACAVAL IMASRDTTTA IGIIVLQSIG
IVAAMTTYSC VLAFSVSRFI ERNQLAFKSL NAVVGLFSIG IGCLWIYNSF A