Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4480 |
Symbol | |
ID | 8360653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5572154 |
End bp | 5572849 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966635 |
Product | hypothetical protein |
Protein accession | YP_003124123 |
Protein GI | 256423470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.17724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.265147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGAT ATCTTTTTAC AGACTCTTTA TTATTGGGCA TACAGCACTC TTTCGAACCC GACCATATGG CGGCCGTATC CGTGCTGGCA TCAGAAAAAG CCAATAATAA GATCAGTCTT TCAAAGCTGA TATGGCGCTC TTCACAATGG GCTTTAGGAC ATTCGGTTAC GCTGATACTA TTCAGTTGCT TTGCGCTGTT ATTGAAATCT GCCTTACCGC TGGATCTTTC CGGTTATGCG GAAATGATAG TAGGGCCGGT GATGATATGG CTGGGTATCT CTGCCATCCG CAGAAATCAT CAGCTCAAGC AGATGATGGC CACACACAAG ACCTTTTCAG AGCATGAACA TATCAACAAT GCCCTGCATA TCCATGGTAA ACAGGGACAG GAAATTGCGA TGAATCCATT AAGCCGTTCC TTCTGGGTAG GGATGCTGCA TGGACTGGCC GGAACCGGTG GCGCCTGTGC CGTAGCCCTG ATCATGGCCT CCCGTGATAC CACAACGGCT ATCGGTATCA TTGTGTTGCA AAGTATCGGC ATTGTCGCCG CGATGACCAC TTACAGCTGT GTACTGGCAT TTTCAGTATC CCGGTTTATT GAGCGGAACC AGCTGGCATT TAAATCACTC AACGCAGTTG TAGGACTGTT TTCCATTGGC ATAGGCTGTC TCTGGATCTA TAACAGTTTT GCGTAA
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Protein sequence | MIGYLFTDSL LLGIQHSFEP DHMAAVSVLA SEKANNKISL SKLIWRSSQW ALGHSVTLIL FSCFALLLKS ALPLDLSGYA EMIVGPVMIW LGISAIRRNH QLKQMMATHK TFSEHEHINN ALHIHGKQGQ EIAMNPLSRS FWVGMLHGLA GTGGACAVAL IMASRDTTTA IGIIVLQSIG IVAAMTTYSC VLAFSVSRFI ERNQLAFKSL NAVVGLFSIG IGCLWIYNSF A
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