Gene Cpin_4470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4470 
Symbol 
ID8360643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5562247 
End bp5562612 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content45% 
IMG OID644966625 
Producthypothetical protein 
Protein accessionYP_003124113 
Protein GI256423460 
COG category[C] Energy production and conversion 
COG ID[COG3411] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.295194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0572132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA AAGATCTGAC TAAAGTTCAG AAGATCCTTT TTATCTGTAA TGGAGGCACC 
TGTAATAAAA ACAACGCCGC TGATGAAAAC ACGGTACAGC TCAGAACGCA CCTCACAGAG
CATGACCTCA ATGACGAAAT CCACACTGTT CGTACCAAAT GCCTGGGACA ATGTACCTGG
GGACCAATGA TCTTTATGCA TCCGGAAGGT CTCTGGTATA AAAATGTAAA CCTGGATACC
ACCCGCGAGA TCGTGACGCA ACATCTCCTG AAAAATGAAT TGGTACTGGA ACATGTGCAT
TTCCCGGAAG CTGAAGAGGT AGCATCCAGT CCGCTTACGC TCAAAAGCCC TCAGCCAAAC
GAATAA
 
Protein sequence
MAIKDLTKVQ KILFICNGGT CNKNNAADEN TVQLRTHLTE HDLNDEIHTV RTKCLGQCTW 
GPMIFMHPEG LWYKNVNLDT TREIVTQHLL KNELVLEHVH FPEAEEVASS PLTLKSPQPN
E