Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4443 |
Symbol | |
ID | 8360616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5536111 |
End bp | 5536863 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966600 |
Product | hypothetical protein |
Protein accession | YP_003124088 |
Protein GI | 256423435 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0884605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.12904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACA AATTTATCGC AGGCTTATTA TTAGTCGGAG CTATGCTATT TTCTATTGTT ACAAAAGCAC AGGACAAAAT TAATACAGAT CGCCCGGATC AGACAGATGG CGCCAATGTC GTTGAGCAGA AGACCCTTCA ACTGGAGACA GAGTTTTACT ATAACAAATT AAGCGCTGGC AAAACGGCCC TTATTTCATC CTCCCTGCTA CGATACGGAC TGTTTAAAAA CTTAGAGGCC AGGTTACTGG TAGAACAAGG CCAGGAAAGG GATCTGTTTA TTTCAGAGAC CACACAGGGA CAGTATCCGC TGGCGCTGAG CACAAAGATA TCGCTACTGA AAGATAAAAA ACATCTTCCT GATATCGCAT TGATATCCTA TCTGCACATT CCCATTACAT CCCACAGCGG CAATTATGGA TACTGGTCGC CTCAGGTCAC CCTTGTACTG GAAAAAGAGC TGGATAAGCT AACTGTGACG GCCAACGGTT CATACAAACA GGAAGCCTTC GAAAAAAGCT GGATATGGCA GGTGAGCGGA GATCTGAAAT ATGAACTGAC TGACCGGTTT ACTGTCTTTG GAGAATACTT TGCACAATAT GCAACAGGAG ATTCCCCAAT ACATAATGCA GATGGCGGAG TGCTGTATCA TATCACATCT GACCTGCTCG TACATCTTGC CTTTGGTCAT ACGATCTTTA CCAAGGAACA CAACTATTTT GGAAATGCCG GTCTGGCATT CCGTATACAC TAA
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Protein sequence | MTNKFIAGLL LVGAMLFSIV TKAQDKINTD RPDQTDGANV VEQKTLQLET EFYYNKLSAG KTALISSSLL RYGLFKNLEA RLLVEQGQER DLFISETTQG QYPLALSTKI SLLKDKKHLP DIALISYLHI PITSHSGNYG YWSPQVTLVL EKELDKLTVT ANGSYKQEAF EKSWIWQVSG DLKYELTDRF TVFGEYFAQY ATGDSPIHNA DGGVLYHITS DLLVHLAFGH TIFTKEHNYF GNAGLAFRIH
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