Gene Cpin_4443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4443 
Symbol 
ID8360616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5536111 
End bp5536863 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content44% 
IMG OID644966600 
Producthypothetical protein 
Protein accessionYP_003124088 
Protein GI256423435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0884605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.12904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA AATTTATCGC AGGCTTATTA TTAGTCGGAG CTATGCTATT TTCTATTGTT 
ACAAAAGCAC AGGACAAAAT TAATACAGAT CGCCCGGATC AGACAGATGG CGCCAATGTC
GTTGAGCAGA AGACCCTTCA ACTGGAGACA GAGTTTTACT ATAACAAATT AAGCGCTGGC
AAAACGGCCC TTATTTCATC CTCCCTGCTA CGATACGGAC TGTTTAAAAA CTTAGAGGCC
AGGTTACTGG TAGAACAAGG CCAGGAAAGG GATCTGTTTA TTTCAGAGAC CACACAGGGA
CAGTATCCGC TGGCGCTGAG CACAAAGATA TCGCTACTGA AAGATAAAAA ACATCTTCCT
GATATCGCAT TGATATCCTA TCTGCACATT CCCATTACAT CCCACAGCGG CAATTATGGA
TACTGGTCGC CTCAGGTCAC CCTTGTACTG GAAAAAGAGC TGGATAAGCT AACTGTGACG
GCCAACGGTT CATACAAACA GGAAGCCTTC GAAAAAAGCT GGATATGGCA GGTGAGCGGA
GATCTGAAAT ATGAACTGAC TGACCGGTTT ACTGTCTTTG GAGAATACTT TGCACAATAT
GCAACAGGAG ATTCCCCAAT ACATAATGCA GATGGCGGAG TGCTGTATCA TATCACATCT
GACCTGCTCG TACATCTTGC CTTTGGTCAT ACGATCTTTA CCAAGGAACA CAACTATTTT
GGAAATGCCG GTCTGGCATT CCGTATACAC TAA
 
Protein sequence
MTNKFIAGLL LVGAMLFSIV TKAQDKINTD RPDQTDGANV VEQKTLQLET EFYYNKLSAG 
KTALISSSLL RYGLFKNLEA RLLVEQGQER DLFISETTQG QYPLALSTKI SLLKDKKHLP
DIALISYLHI PITSHSGNYG YWSPQVTLVL EKELDKLTVT ANGSYKQEAF EKSWIWQVSG
DLKYELTDRF TVFGEYFAQY ATGDSPIHNA DGGVLYHITS DLLVHLAFGH TIFTKEHNYF
GNAGLAFRIH