Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4390 |
Symbol | |
ID | 8360563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5461122 |
End bp | 5461901 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966549 |
Product | hypothetical protein |
Protein accession | YP_003124037 |
Protein GI | 256423384 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0337176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTA TTTTTACATC CGTTCTGCTG CTCACATTAC TGATTGGTTG TACAAAAAAT ATCGACGTAC AACTTAGATC TGCTCCTTCG CAGATCGTCA TTCAGGGCAC CATTACAAAT GGTGGAGACC CTTATTATAT CAGGATTAAC CGCACCGTGC CATTTGATGC AGAAAACACT TATCCGGCGG TTTCCGGTGC AGGCGTGTAT GTGCTGGACA GTACGGACAA TAAACTATAC CGCTTCTACG AATCTCCCAT TGACGCAGGC GTTTACATAT CAGCTTATCT CGTTGGTCAG ATGGGCCATA CCTACAAAAT GTATGTCAAT ATCGATGGGG AGGAATACAT CGCCACCTCT ACGATGCCTA ATCTGGTAAC GATGAAGGGC ATTTCATTTA CGCAGACGAA AATATTGGAA GAGACCAGAA ATCTGCCGCA GGTAAATTTC CAGGATCCGC CCAATGTGAA GAATTACTAT GTCTTTTCTT TACTGGTGAA TGATGTGCCT TACCAGGCAT TTTATGCGCT GGATGACCGA CTAAGCGATG GCAATTTTGT CAGACACCAG CTGTATATGG ACAGCGCGTA TATACAGAAG GAAGATGTCG TGAAAGTCAT CATGGCAAAT GTAGACAGGA ATATCTATAA CTATTTTAAT GTATTGCAAG CAAACGGCGG AACCTCAGGT ACCCCCTCCA ATCCACCTTC TAATATATCC AATGGCGCCC TGGGGTATTT TGGTGCCTCC AGTGTTGATG TGAGATCGAT ACAGTTTTAA
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Protein sequence | MKTIFTSVLL LTLLIGCTKN IDVQLRSAPS QIVIQGTITN GGDPYYIRIN RTVPFDAENT YPAVSGAGVY VLDSTDNKLY RFYESPIDAG VYISAYLVGQ MGHTYKMYVN IDGEEYIATS TMPNLVTMKG ISFTQTKILE ETRNLPQVNF QDPPNVKNYY VFSLLVNDVP YQAFYALDDR LSDGNFVRHQ LYMDSAYIQK EDVVKVIMAN VDRNIYNYFN VLQANGGTSG TPSNPPSNIS NGALGYFGAS SVDVRSIQF
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