Gene Cpin_4390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4390 
Symbol 
ID8360563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5461122 
End bp5461901 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content44% 
IMG OID644966549 
Producthypothetical protein 
Protein accessionYP_003124037 
Protein GI256423384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0337176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTA TTTTTACATC CGTTCTGCTG CTCACATTAC TGATTGGTTG TACAAAAAAT 
ATCGACGTAC AACTTAGATC TGCTCCTTCG CAGATCGTCA TTCAGGGCAC CATTACAAAT
GGTGGAGACC CTTATTATAT CAGGATTAAC CGCACCGTGC CATTTGATGC AGAAAACACT
TATCCGGCGG TTTCCGGTGC AGGCGTGTAT GTGCTGGACA GTACGGACAA TAAACTATAC
CGCTTCTACG AATCTCCCAT TGACGCAGGC GTTTACATAT CAGCTTATCT CGTTGGTCAG
ATGGGCCATA CCTACAAAAT GTATGTCAAT ATCGATGGGG AGGAATACAT CGCCACCTCT
ACGATGCCTA ATCTGGTAAC GATGAAGGGC ATTTCATTTA CGCAGACGAA AATATTGGAA
GAGACCAGAA ATCTGCCGCA GGTAAATTTC CAGGATCCGC CCAATGTGAA GAATTACTAT
GTCTTTTCTT TACTGGTGAA TGATGTGCCT TACCAGGCAT TTTATGCGCT GGATGACCGA
CTAAGCGATG GCAATTTTGT CAGACACCAG CTGTATATGG ACAGCGCGTA TATACAGAAG
GAAGATGTCG TGAAAGTCAT CATGGCAAAT GTAGACAGGA ATATCTATAA CTATTTTAAT
GTATTGCAAG CAAACGGCGG AACCTCAGGT ACCCCCTCCA ATCCACCTTC TAATATATCC
AATGGCGCCC TGGGGTATTT TGGTGCCTCC AGTGTTGATG TGAGATCGAT ACAGTTTTAA
 
Protein sequence
MKTIFTSVLL LTLLIGCTKN IDVQLRSAPS QIVIQGTITN GGDPYYIRIN RTVPFDAENT 
YPAVSGAGVY VLDSTDNKLY RFYESPIDAG VYISAYLVGQ MGHTYKMYVN IDGEEYIATS
TMPNLVTMKG ISFTQTKILE ETRNLPQVNF QDPPNVKNYY VFSLLVNDVP YQAFYALDDR
LSDGNFVRHQ LYMDSAYIQK EDVVKVIMAN VDRNIYNYFN VLQANGGTSG TPSNPPSNIS
NGALGYFGAS SVDVRSIQF