| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4301 |
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| Symbol | |
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| ID | 8360474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5360541 |
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| End bp | 5361290 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966463 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123951 |
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| Protein GI | 256423298 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.865881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.154046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAC TAGCAAACAA AGTCGCCATC GTAACTGGCG CTTCAAAAGG AATAGGAGCC
GCGATTGCCC AAAAGCTGGC TGCTGAAGGC GCTTCAGTAG TAGTGAACTA TGCAAACGCA
AAGACAGATG CTGAAAATGT AGTTTCGCTT ATTACAGATA ATGGTGGTCA GGCCATCGCC
TTGCAGGGGG ATGTGTCAAA GTCCGCCGAC ATTGACCAGC TTTTCGCCCA AACGGTTCAG
CATTACGGCG GAGTTGATAT ATTGGTCAAC AATGCTGGTA TCTATCAATG GGGCGCCCTT
GAAGAAGTGA CAGAAGAAGG ATTTCAACGG CAGTTCAATA TAAATGTGCT GGGTGTTCTG
CTCGCATCAA AAGCTGCCGC CAGGAATTTC CCTGAAACGG GTGGCAGTAT TATTAATATA
GGTTCTGCTA TATCCAGCAA TCAGCCTCCG GGAAGTGCGA TTTATACCGC TACTAAAAGC
GCTGTTGATT CTATTACACG GGTGCTCTCC AAAGAGCTTG GCGCAAGGAA GATACGCGTC
AACTCGATTA ACCCCGGAAT GGTAGACACA GAGGGTGCAA GAACTGCCGG ATTTATTGGC
AGCGAAATGG AAACTTTCAT GGTGAATAAT ACCCCGCTCC AACGGGTAGG CGTACCTGAA
GATGTTGCGT TAGTAGCTGC ATTTCTTTCT TCAGAAGAAT CAAGATGGCT AACAGGTGAA
GTGATATTAG CCAGTGGCGG GGTGCGATAG
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| Protein sequence | MKRLANKVAI VTGASKGIGA AIAQKLAAEG ASVVVNYANA KTDAENVVSL ITDNGGQAIA
LQGDVSKSAD IDQLFAQTVQ HYGGVDILVN NAGIYQWGAL EEVTEEGFQR QFNINVLGVL
LASKAAARNF PETGGSIINI GSAISSNQPP GSAIYTATKS AVDSITRVLS KELGARKIRV
NSINPGMVDT EGARTAGFIG SEMETFMVNN TPLQRVGVPE DVALVAAFLS SEESRWLTGE
VILASGGVR
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