Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4292 |
Symbol | |
ID | 8360465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5354117 |
End bp | 5355487 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644966454 |
Product | hypothetical protein |
Protein accession | YP_003123942 |
Protein GI | 256423289 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.927933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0728263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAAT GGACGGTGAT TTACCTGATA AAAGCAACAT CTGTAACCGA GGTTGCCATG GGACAAATGC TTGACAAATT AAAAGCAAGC GATTTATCGA AAGACATTGC GGTGGTATTA TGTATATCCG CTCCCCTATC TTCTATCAGC AAATACCTGA AAGTACCCTC AGGGCCCGGA GATGCGAACA GAAAAACTAC CTGCTTCTTC GAATTAGCAT TGACTACAAA TAAAAAAAAT GTAGAGAAAC CCAAATTTCT GTTTCTCTCT GAAGCTGCGG ACTTCAACAT TAAAAGCACA ACTTCTGTAG CAAAATACTT TAAAAACCTG GTCCTTACCC AATATCCGGC GGACAAGTAC ATGCTATTCA CCTGGGAGCA CGGTTCTGCT TTTGGTATAT TTAAAGAAGG TGTACTGACT GTTAATGATA CTACTCCGCC AGATCAGTCT ATGACCATGG AAGCGCGCTT CGTCCGTCAG GCAATAAATG TAAAGTCCGA CCAGGTAAGG ATAAGAGAAT CTATAGACAC CGTCCAGATT GCGGTTAATA ATTTAGCAGC GACACAATTT GACATGTTAA CGATGGAAGA ACTGAAAGAC GCTATAGAAA TCGGCTTTGC AGGCAGAAAG GTTGATGTCC TGGTTATGCT AAACTGCTGG ATGCAATTCT TCGATACCGG ATTAACCTTA TCTAAGCATG TAGACTATCT TGTAGGACCA GAAACTGACA TGGATTTTAA TGGTTATAAC TATAGTGCCA TCTTCGGATT ACTTAGTTCA CAGCCGGACA TATCTCCCCG GGGACTCTCT TCGTTTATTG TTACATCATT CAAAGATAAA GCAGACGCTG ATGCGCTGGG TTCAGACAAT AGAACGGCTT TATTTGCAGC CTGTCTGAAG TATTACCCCT CGCTGGCCAA ATTGACAAGT GAAATATGTG AAGCATTGAT CCCATTGCTA AAAGACCACT TTAGGCAATT CGACATTGCG AGAACCAATT GTCTATTCAT TGAATTAAAA TACTTATTAG CTGACTTGTC CAGTTTCTTC TACCATATAA AAATTCAGCT ATACGAACAT TTAGATCCTA GTGTCATTAA AAAAATAGAT CAGGCTCATT TGATAATGCA CGAGATGATT GTTCAGCGTG CTTTAGGAAG AGGGATAAAC ACAGATCTTC AGTTCCCTCC TGACTACCCA TTAGGGATTT CTGTCTGCTT TCCTCAAAGA GAAAGTCAGA TAGAAAGCGA CTTCTATCTG ACATACATAC TACAGAATTC TGAGTTTGCT ACAATATTTT CGAAACGATA CCTATGGGAT GATTTTATTG CGGCATTTAT TCAGCAGGCA AAAGCAGAAG GACTTAGTTA A
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Protein sequence | MYKWTVIYLI KATSVTEVAM GQMLDKLKAS DLSKDIAVVL CISAPLSSIS KYLKVPSGPG DANRKTTCFF ELALTTNKKN VEKPKFLFLS EAADFNIKST TSVAKYFKNL VLTQYPADKY MLFTWEHGSA FGIFKEGVLT VNDTTPPDQS MTMEARFVRQ AINVKSDQVR IRESIDTVQI AVNNLAATQF DMLTMEELKD AIEIGFAGRK VDVLVMLNCW MQFFDTGLTL SKHVDYLVGP ETDMDFNGYN YSAIFGLLSS QPDISPRGLS SFIVTSFKDK ADADALGSDN RTALFAACLK YYPSLAKLTS EICEALIPLL KDHFRQFDIA RTNCLFIELK YLLADLSSFF YHIKIQLYEH LDPSVIKKID QAHLIMHEMI VQRALGRGIN TDLQFPPDYP LGISVCFPQR ESQIESDFYL TYILQNSEFA TIFSKRYLWD DFIAAFIQQA KAEGLS
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