Gene Cpin_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4292 
Symbol 
ID8360465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5354117 
End bp5355487 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content40% 
IMG OID644966454 
Producthypothetical protein 
Protein accessionYP_003123942 
Protein GI256423289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.927933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0728263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAT GGACGGTGAT TTACCTGATA AAAGCAACAT CTGTAACCGA GGTTGCCATG 
GGACAAATGC TTGACAAATT AAAAGCAAGC GATTTATCGA AAGACATTGC GGTGGTATTA
TGTATATCCG CTCCCCTATC TTCTATCAGC AAATACCTGA AAGTACCCTC AGGGCCCGGA
GATGCGAACA GAAAAACTAC CTGCTTCTTC GAATTAGCAT TGACTACAAA TAAAAAAAAT
GTAGAGAAAC CCAAATTTCT GTTTCTCTCT GAAGCTGCGG ACTTCAACAT TAAAAGCACA
ACTTCTGTAG CAAAATACTT TAAAAACCTG GTCCTTACCC AATATCCGGC GGACAAGTAC
ATGCTATTCA CCTGGGAGCA CGGTTCTGCT TTTGGTATAT TTAAAGAAGG TGTACTGACT
GTTAATGATA CTACTCCGCC AGATCAGTCT ATGACCATGG AAGCGCGCTT CGTCCGTCAG
GCAATAAATG TAAAGTCCGA CCAGGTAAGG ATAAGAGAAT CTATAGACAC CGTCCAGATT
GCGGTTAATA ATTTAGCAGC GACACAATTT GACATGTTAA CGATGGAAGA ACTGAAAGAC
GCTATAGAAA TCGGCTTTGC AGGCAGAAAG GTTGATGTCC TGGTTATGCT AAACTGCTGG
ATGCAATTCT TCGATACCGG ATTAACCTTA TCTAAGCATG TAGACTATCT TGTAGGACCA
GAAACTGACA TGGATTTTAA TGGTTATAAC TATAGTGCCA TCTTCGGATT ACTTAGTTCA
CAGCCGGACA TATCTCCCCG GGGACTCTCT TCGTTTATTG TTACATCATT CAAAGATAAA
GCAGACGCTG ATGCGCTGGG TTCAGACAAT AGAACGGCTT TATTTGCAGC CTGTCTGAAG
TATTACCCCT CGCTGGCCAA ATTGACAAGT GAAATATGTG AAGCATTGAT CCCATTGCTA
AAAGACCACT TTAGGCAATT CGACATTGCG AGAACCAATT GTCTATTCAT TGAATTAAAA
TACTTATTAG CTGACTTGTC CAGTTTCTTC TACCATATAA AAATTCAGCT ATACGAACAT
TTAGATCCTA GTGTCATTAA AAAAATAGAT CAGGCTCATT TGATAATGCA CGAGATGATT
GTTCAGCGTG CTTTAGGAAG AGGGATAAAC ACAGATCTTC AGTTCCCTCC TGACTACCCA
TTAGGGATTT CTGTCTGCTT TCCTCAAAGA GAAAGTCAGA TAGAAAGCGA CTTCTATCTG
ACATACATAC TACAGAATTC TGAGTTTGCT ACAATATTTT CGAAACGATA CCTATGGGAT
GATTTTATTG CGGCATTTAT TCAGCAGGCA AAAGCAGAAG GACTTAGTTA A
 
Protein sequence
MYKWTVIYLI KATSVTEVAM GQMLDKLKAS DLSKDIAVVL CISAPLSSIS KYLKVPSGPG 
DANRKTTCFF ELALTTNKKN VEKPKFLFLS EAADFNIKST TSVAKYFKNL VLTQYPADKY
MLFTWEHGSA FGIFKEGVLT VNDTTPPDQS MTMEARFVRQ AINVKSDQVR IRESIDTVQI
AVNNLAATQF DMLTMEELKD AIEIGFAGRK VDVLVMLNCW MQFFDTGLTL SKHVDYLVGP
ETDMDFNGYN YSAIFGLLSS QPDISPRGLS SFIVTSFKDK ADADALGSDN RTALFAACLK
YYPSLAKLTS EICEALIPLL KDHFRQFDIA RTNCLFIELK YLLADLSSFF YHIKIQLYEH
LDPSVIKKID QAHLIMHEMI VQRALGRGIN TDLQFPPDYP LGISVCFPQR ESQIESDFYL
TYILQNSEFA TIFSKRYLWD DFIAAFIQQA KAEGLS