| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4257 |
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| Symbol | |
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| ID | 8360430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5319286 |
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| End bp | 5320056 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966423 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123911 |
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| Protein GI | 256423258 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.945101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.897274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAC TAAAAGACAA GGTTACCGTG ATTACAGGCG GTAACAGTGG TATTGGATTT
GGCATTGCTG AGGCGTTCAA CAACGAAGGT GCTGTGGGAA CAATCACCGG AAGAAATGGG
ACTACATTGA AAAATGCTGT TGAAACCCTG GGCAATAATT TTATAGGCGT AAGAGGTGAC
GTAACAAATC TTGATGACCT GGAGGACATG TACAAAACTA CGGTTGACAA GTTTGGCAAG
ATAGACGTAT TGGTGGTGAA TGCCGGTGGC GTCGTGGACG GAGTTCCCCT GATGACAATA
ACTGATGTAA CGGAAGAAGG TTTCGATCAG TATATGAATC TGAATTTTAA AAGTGCCTAT
TTTACCGTCA AACAGTCGCT TCCGTATTTA AATGATGGTG CTTCGATTAT ATTGATTGGA
TCGAATGCTG CATATCGGGC TGCACCCGGA GCAACAATTT ATGCCGCCGC AAAAGCAGCA
GTTATTTCAC TGGCAAGAGG TTTATCCCTG GATTTATTGT CAAGGAGAAT AAGGGTTAAT
ACGATTTCTC CCGGCTCAAT CGATACTCCC GTTTTTGGAA AGATGGTACC GGCTGAAGCA
GTCGCGCAGG TAAAACAAGT GTATATAGAT CTCACACCGC TTGGAAGGCA AGGCACTCCG
GCTGAGATCG GAAAGACGGC GGTGTTTTTA GCCTCCGATG ATTCATCATT CATTGTAGGC
GCGGATATAT TAGCGGATGG TGGAATGACC AATGCTTTCT CCGTGAAATA A
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| Protein sequence | MSKLKDKVTV ITGGNSGIGF GIAEAFNNEG AVGTITGRNG TTLKNAVETL GNNFIGVRGD
VTNLDDLEDM YKTTVDKFGK IDVLVVNAGG VVDGVPLMTI TDVTEEGFDQ YMNLNFKSAY
FTVKQSLPYL NDGASIILIG SNAAYRAAPG ATIYAAAKAA VISLARGLSL DLLSRRIRVN
TISPGSIDTP VFGKMVPAEA VAQVKQVYID LTPLGRQGTP AEIGKTAVFL ASDDSSFIVG
ADILADGGMT NAFSVK
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