Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4222 |
Symbol | |
ID | 8360395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5278592 |
End bp | 5280514 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644966391 |
Product | hypothetical protein |
Protein accession | YP_003123879 |
Protein GI | 256423226 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAA AACAATACGC CTCATTCTCA GACAGATTTC TTGAGTCGTT TGCTGGCTCT TCTATATTTA GCGAGCCGAA GGTTGCAATA ATCGAATTAA TAGCTAATGC TTGGGATGCT GGTGCAACTG AAGTCAAAAT TAAATGGCCA GAAAAACATG AGGATCCTTT TGAAATAACG GACAATGGTC ATGGAATGAC AGAAACAGAG TTTGAGACCA GATTTATGGT ACTTGCCTAC GAAAGGCTTA AGGAGATGGG AGGATTCGCT CATGTTCCTC CTGATCATAA AGATAAGATT GCCTTGCGAC CAGCCTTCGG AAAAAATGGA AAGGGACGTT TGGCTAGCTT TGCTTTCGGA GAATCGTTCA AGGTCTCAAC AACAAAGCAG GGTATTGAGA GAATATTTAG AATTTTCATT GATAATAATA ATCGTCTCGC GTATCAAAAG ATTGATGAGA AAGAAAGTAG CATTTCTCAT GGTACTACTA TCTTTATTGA GAAGGCATTT AAACCTAGAT TAAGTTTTGA GGATGCAAAG AAGGAAATCG GAATGCGATT CTTAGTAGAT CCAAATTTTA CTGTTTGGGT TAACACTGAA AAGGTCAGCT TTGAGGACGT TCCCAAGAAT CATATCAAAG AATATAATGT TGAGATTAAA GATATTGGGA TTTTTCCTGT TAAAGTTATT GACGTTCAGG CTACGGACAA ATCTACGCAA CTTCATGGTA TTGCTTGGCA GGTTAAGAAT CGTTTAGTGG GTGAGTGTAC CTGGAAAGGG AGTGGAAGTG AACATTTGAT AGATGGCAGA AAATCTGTAG CGAAGAGATA TATATTCATA GTCAATGCTG ATAGTATCGA AGATGCGGTA CTGCCAGATT GGACAGGCTT TAAAAATTAT GATGATAAAT ACAAAAAATC GTGTATTGCT ATTTATACCA GTGTAAAGGA GCATATACTT GATTTGACAA AAGGACAAAG AGAAGAGGCG TTTAAAGATA TAGAGGGTAG TATAAAGCCT ACATTGAGGA AAATGGGTAT AGTAAGCAGA GAGAAATGGG AGAAATTTGT AAGGGAAGTG CAGGAGGAAT GCCCATCAAT TGGAAATGAC GAGTTGGAAA AAATCGCTTC GTTATTGGCG AAACTTGAAA CTTCTGAATC TAAATACGGC TTAATTAACA CCTTGGCGAA TGCCTCTGTT GAAGATCTAG ATAATCTCAG TAAGATTATT GAAGAATGGG ATATTGATGT CGCAAAAATC GTATTAGACG AAATAGAATG GAGAACTAAA TTGATAGAAA AGTTGCAATC GAAGGTGTTG AATGAGGGTT CAGATGAAGT TCAAGAACTT CAACCACTCT TTCACAGAGG GCTTTGGATT TTTGGTCCTG AATATGAGAC TATCGAATAC ACATCGAATA AGGGAATGAC TCAGGTGATT CAACAGTTAT TTGGCTCTGA AATAAAAGGT AGCTCCACAA GGCCAGATTT TGCAATTTTA AAGGATGGGA CTGTGGGATT ATATTCATTG CCCAAATTTG ATGAAGATGA TTTTGGCGAA ATAGGGGTAG ATCGTTTGGT TGTAATTGAA TTAAAACGTC CTGGTATTCC CATTGACCGA GAACAAAAAG GACAAGCATG GAAATATGTA AAGGAACTTT TTTCCAAGGG GTTGCTGAAA GATTACTCTC AAGTTGTTTG TTTCGTACTA GGTAGTAAAA TTGATCCACT CGAATCAGGA AAGAGCACTG AGATGAACGG TAGAGTGGTG ATTTTTCCCA TGGAATATGA TATGGTGATG CGAAGGACAA AGAGTAGATT GTTAAACTTA CATGAGAAAA TACGTCAGGC ACCATTTCTG AAAGAGACAA GAATAAGAGC ATATTTGAAC GACAAAGCTC AATTAAATAT GTTCGAAGCG TGA
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Protein sequence | MSQKQYASFS DRFLESFAGS SIFSEPKVAI IELIANAWDA GATEVKIKWP EKHEDPFEIT DNGHGMTETE FETRFMVLAY ERLKEMGGFA HVPPDHKDKI ALRPAFGKNG KGRLASFAFG ESFKVSTTKQ GIERIFRIFI DNNNRLAYQK IDEKESSISH GTTIFIEKAF KPRLSFEDAK KEIGMRFLVD PNFTVWVNTE KVSFEDVPKN HIKEYNVEIK DIGIFPVKVI DVQATDKSTQ LHGIAWQVKN RLVGECTWKG SGSEHLIDGR KSVAKRYIFI VNADSIEDAV LPDWTGFKNY DDKYKKSCIA IYTSVKEHIL DLTKGQREEA FKDIEGSIKP TLRKMGIVSR EKWEKFVREV QEECPSIGND ELEKIASLLA KLETSESKYG LINTLANASV EDLDNLSKII EEWDIDVAKI VLDEIEWRTK LIEKLQSKVL NEGSDEVQEL QPLFHRGLWI FGPEYETIEY TSNKGMTQVI QQLFGSEIKG SSTRPDFAIL KDGTVGLYSL PKFDEDDFGE IGVDRLVVIE LKRPGIPIDR EQKGQAWKYV KELFSKGLLK DYSQVVCFVL GSKIDPLESG KSTEMNGRVV IFPMEYDMVM RRTKSRLLNL HEKIRQAPFL KETRIRAYLN DKAQLNMFEA
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