Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4203 |
Symbol | |
ID | 8360376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5254307 |
End bp | 5254627 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644966372 |
Product | response regulator receiver protein |
Protein accession | YP_003123861 |
Protein GI | 256423208 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.642099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGC CACTATTACT CCTTATTAAG GATACAACCC GTGAAAAAAT AGAAAATGAA GAGATACTAT ATGCTACTGT TGAAAAGCAT TATACCAAGA TCGTACTTAT CAATGACAGA AACTTTATAG TAAGAACCAG CCTCCGGCGA TTTGAAAAGA GACTTCCCCC TAACCTTTTC ATCCGCATCC ACAAGAATTA TATAGTCTGC CTGCGCCATA TCAGGTATGT CGACACAGTC GTCACTATGA AAAACGGCGA ACCGCTCCCT ATCAGCAAAG AATTCAAAGA ATCCTTCCTT AGCAATTTTG ACATCATTTA A
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Protein sequence | MQKPLLLLIK DTTREKIENE EILYATVEKH YTKIVLINDR NFIVRTSLRR FEKRLPPNLF IRIHKNYIVC LRHIRYVDTV VTMKNGEPLP ISKEFKESFL SNFDII
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