Gene Cpin_4203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4203 
Symbol 
ID8360376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5254307 
End bp5254627 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content39% 
IMG OID644966372 
Productresponse regulator receiver protein 
Protein accessionYP_003123861 
Protein GI256423208 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.642099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGC CACTATTACT CCTTATTAAG GATACAACCC GTGAAAAAAT AGAAAATGAA 
GAGATACTAT ATGCTACTGT TGAAAAGCAT TATACCAAGA TCGTACTTAT CAATGACAGA
AACTTTATAG TAAGAACCAG CCTCCGGCGA TTTGAAAAGA GACTTCCCCC TAACCTTTTC
ATCCGCATCC ACAAGAATTA TATAGTCTGC CTGCGCCATA TCAGGTATGT CGACACAGTC
GTCACTATGA AAAACGGCGA ACCGCTCCCT ATCAGCAAAG AATTCAAAGA ATCCTTCCTT
AGCAATTTTG ACATCATTTA A
 
Protein sequence
MQKPLLLLIK DTTREKIENE EILYATVEKH YTKIVLINDR NFIVRTSLRR FEKRLPPNLF 
IRIHKNYIVC LRHIRYVDTV VTMKNGEPLP ISKEFKESFL SNFDII