| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4177 |
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| Symbol | |
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| ID | 8360350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5222127 |
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| End bp | 5223275 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966346 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003123835 |
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| Protein GI | 256423182 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.485903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0322229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC ACCAACAAAG AATTGCTTAT CTATTAGCAC GTTATGCAGA CAAAACATGC
AGCCGGGAAG AGCTGGATGA ACTGTTTTCT GCTATTGGTC AGGGTGATGG TCCGGAAGGA
CTGGAACAAT TGCTGGAAGA GATATGGCAG GCAAGACATC CTGCCCCGGA GATTGATTAT
GAAGCAGTGT ACCGGCAGAT TAAACCCGCT GTTCCGGTAC GGAAGACTAT TCCCCTCAAA
AGAATCGCTA TCGCTGCATC GTTATTGTTA CTGGCTGGTA CCGCCTACTG GTTGCTACCA
TCCAAACGGA CCGGAAAGCA AGCGACGGTG CTGATACAGC CTGCTCAGCG GCGTATTCTG
CCGGCGACCA ATAAAGCCGT ACTGACATTA TCAGATGGTA CGACAGTGCC GCTGGATAGT
ACAGGGAAAC AGCTGATTCA GCAGGGTAAC GTAGCGATCA GACAACAAAA CGGACAGCTA
TTATATGCCA GTCAGCCAAC AGATGGCAAT ATTCACTATA ACAAACTCAC CACGCCAAGA
GGAGGACAAT TCAGACTCGT ATTGCCTGAT GGCACTAAAG TATGGCTGAA CTCAGCTTCC
ATGTTACGCT ACCCCACCAC TTTCTCAGGA AAGGAACGCG TTGTGGAACT GGACGGACAG
GGATACTTTG AGATCGCAGC CAATGCGCAG CAACCATTTA AAGTAAAGGT GCGTGACATG
GAAGTGCTTG TATTGGGCAC AGACTTCGAT GTAATGGCCT ATGGGGATGA AAATTCAGTT
AATACCACAT TGCTCACCGG TAGCATACTG GTGAAGGAAG GCAGTACAAA ACAATTGTTA
CAACCTGGAC AACAGGCAGT GATAGACAAC CAGGATCATC AGCTGACCGT AAAAACAGCT
GACATCAGAA AAGTAACCGC GTGGAAGAAC GGCATGTTTG TTTTCAATGA CATGGCTTTA
CCCGCCATAT TAAGAGAAGT AGCCCGCTGG TACGATGTAG ACATCGTTTA TAAAGCCAGC
CCCGGAGCGG AATTATACGG AGGCGGTATA GGAAGAGACC TGCAGCTGGC AGACGTACTG
GCCCTGCTGG AAGGGAATGG CTTTAATCAT TTCGGGATTG AAGGTAGAAA AGTAATTGTA
TTACCATAA
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| Protein sequence | MPDHQQRIAY LLARYADKTC SREELDELFS AIGQGDGPEG LEQLLEEIWQ ARHPAPEIDY
EAVYRQIKPA VPVRKTIPLK RIAIAASLLL LAGTAYWLLP SKRTGKQATV LIQPAQRRIL
PATNKAVLTL SDGTTVPLDS TGKQLIQQGN VAIRQQNGQL LYASQPTDGN IHYNKLTTPR
GGQFRLVLPD GTKVWLNSAS MLRYPTTFSG KERVVELDGQ GYFEIAANAQ QPFKVKVRDM
EVLVLGTDFD VMAYGDENSV NTTLLTGSIL VKEGSTKQLL QPGQQAVIDN QDHQLTVKTA
DIRKVTAWKN GMFVFNDMAL PAILREVARW YDVDIVYKAS PGAELYGGGI GRDLQLADVL
ALLEGNGFNH FGIEGRKVIV LP
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