Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4167 |
Symbol | |
ID | 8360340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5207087 |
End bp | 5207587 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966336 |
Product | DinB family protein |
Protein accession | YP_003123825 |
Protein GI | 256423172 |
COG category | [S] Function unknown |
COG ID | [COG2318] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0325153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00159328 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACAGG AACTGATCAG CACACCATCT GTTATTACCC CGGCGGAACT GCTCACTCAC TGGCAGGGAC ACCGCACATT AACCCGTAAA GTCATTGAAG CATTTCCGGA GAAAGACCTG TTTTCATTTT CTGTCGGCGG TATGCGTCCT TTCGCAGAAC TGGCGCTGGA AATGATCAGT ATGAATGACC CAGGTATTGA TGGTATACTT ACCGGTAAAT GGTCAACCGA CTTTTCTACG TATGAAAACG GCCGTGGTCC GAAAACAAAA GCCGACCTGC TGGCGCTCTG GGATCAACTA ACGGAAAAGC TTAATCGTTT ATGGCCACAA ATACCTGTAG CGCGTTTTCA TGAGATTGAT CTGGCTTTTG GTCAGTGGGA AGGTCCTATT TATTTTATCC TGTTTTACTG GATCGATAAT GAAATCCATC ACAGGGCACA GGGGTATGTA TATCTGCGGG CATTGGGTAT TGAGCCACCT GCTTTCTGGG ACAGACAATA A
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Protein sequence | MTQELISTPS VITPAELLTH WQGHRTLTRK VIEAFPEKDL FSFSVGGMRP FAELALEMIS MNDPGIDGIL TGKWSTDFST YENGRGPKTK ADLLALWDQL TEKLNRLWPQ IPVARFHEID LAFGQWEGPI YFILFYWIDN EIHHRAQGYV YLRALGIEPP AFWDRQ
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