Gene Cpin_4167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4167 
Symbol 
ID8360340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5207087 
End bp5207587 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content47% 
IMG OID644966336 
ProductDinB family protein 
Protein accessionYP_003123825 
Protein GI256423172 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0325153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00159328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACAGG AACTGATCAG CACACCATCT GTTATTACCC CGGCGGAACT GCTCACTCAC 
TGGCAGGGAC ACCGCACATT AACCCGTAAA GTCATTGAAG CATTTCCGGA GAAAGACCTG
TTTTCATTTT CTGTCGGCGG TATGCGTCCT TTCGCAGAAC TGGCGCTGGA AATGATCAGT
ATGAATGACC CAGGTATTGA TGGTATACTT ACCGGTAAAT GGTCAACCGA CTTTTCTACG
TATGAAAACG GCCGTGGTCC GAAAACAAAA GCCGACCTGC TGGCGCTCTG GGATCAACTA
ACGGAAAAGC TTAATCGTTT ATGGCCACAA ATACCTGTAG CGCGTTTTCA TGAGATTGAT
CTGGCTTTTG GTCAGTGGGA AGGTCCTATT TATTTTATCC TGTTTTACTG GATCGATAAT
GAAATCCATC ACAGGGCACA GGGGTATGTA TATCTGCGGG CATTGGGTAT TGAGCCACCT
GCTTTCTGGG ACAGACAATA A
 
Protein sequence
MTQELISTPS VITPAELLTH WQGHRTLTRK VIEAFPEKDL FSFSVGGMRP FAELALEMIS 
MNDPGIDGIL TGKWSTDFST YENGRGPKTK ADLLALWDQL TEKLNRLWPQ IPVARFHEID
LAFGQWEGPI YFILFYWIDN EIHHRAQGYV YLRALGIEPP AFWDRQ