| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4101 |
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| Symbol | |
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| ID | 8360274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5103820 |
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| End bp | 5104563 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644966273 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123762 |
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| Protein GI | 256423109 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00189407 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACATC TTGAAAACAA AGTCGCACTG ATCACAGGCG GTAGCCGTGG CATGGGTGCA
GCGATCGTAA AACAGCTGGT AGCTGCCGGC GCCAGGGTGG CTTTTACATA TGTACGTTCT
GCCGATCAGG CGGCAGCGCT GGCCGACGCC ATCGAACAAG GCTATGGACA AAAACCACTG
GCTCTACAAG TAGATAGCGC TGACCATAAC GCGGTTACGG CCGCCATTGA AACCGTTGTT
TCCAGACTGG GAGCTATTGA TATCCTGGTC AATAACGCCG GTGTATATGG AGAAAGACCG
TTTGAAGAGC AAACCGTTGC CGACTATGAT CAGATGATGG ATATCAACGT GAAAGCCGTA
TACGTAGCCT CAGTAACTGC CGCCAGACAT ATGAGAACAG GTGGTCGTAT CATCAGCATC
GGCAGTAATA TGGCCGATCG TGTAGCGCAT CCCGGTGCAA CGCTCTATTC CATGAGTAAA
TCAGCGCTGG TAGGCATGAC GAAAGGGATG GCCCGTGAAC TTGGACCCAG AGGCATCACT
GTCAACCTGG TTCAACCTGG CCCCATCGAT ACCGATATGA ATCCGGCCGA TAGTGCTTAT
GCAGCTGGTC AGATAGCCCG GCTGGCATTG ACACATTTTG GTAATGTGAA CGATATTGCC
AGTCTGGTGA ACTTCCTGGC AGGACCTGAA AGCGGGTTTA TCACTGGCAG TGCATTGACG
ATTGACGGCG GCTCAAATGC CTGA
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| Protein sequence | MKHLENKVAL ITGGSRGMGA AIVKQLVAAG ARVAFTYVRS ADQAAALADA IEQGYGQKPL
ALQVDSADHN AVTAAIETVV SRLGAIDILV NNAGVYGERP FEEQTVADYD QMMDINVKAV
YVASVTAARH MRTGGRIISI GSNMADRVAH PGATLYSMSK SALVGMTKGM ARELGPRGIT
VNLVQPGPID TDMNPADSAY AAGQIARLAL THFGNVNDIA SLVNFLAGPE SGFITGSALT
IDGGSNA
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