| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4092 |
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| Symbol | |
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| ID | 8360265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5090344 |
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| End bp | 5091282 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966264 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_003123753 |
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| Protein GI | 256423100 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.667358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00263168 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTACAA GAAAAGAATT TTTGAAAACA GCCGGCCTGT TAGGAATGGC TGGTATGATA
GGACCAGCCT CATTGGTCGC AGCACCCGCT CAACAGAAAA AACCAGCATC TTCCTGGATT
GACGGCTCCC GCCTTGTCGT GAGTGTATCC ATGCAGTTTG AAGCAGGTGG CCAACCCGTA
AATGCGGAAA GTCCGTTTCC GCAGAATATG GTCAAAGGAT ATAAAGACCT TCCTTCCGAA
ACATGGTACC AGTATGGTTA CAAGGAAGGC ATTCCCCGTA TGCTGGATAC CTGGGATAAA
CTGGGTATCA AAGTAACCTC TCACATGGTA GGATCTGCTG TATTAAAGAA CCCTTCCCTG
GCAAAAGAAA TCGTACAACG GGGACACGAA GCCGCTGCAC ACGGCAGAGA CTGGGCCACA
CAGTATACCA TGTCCTACGA GGAAGAACGC AAATTTATAC AGGACGGTGT TGATGCAGTG
AAACAGGTAA CAGGTATGAC GCCGAAAGGT TATAACGCAA ACTGGTTACG CAGAGGGGAG
CATACCCTGC AGATCTTACA GGAACTGGGC TTTACCTATC ATATTGACGA TCTTAGCAGA
GACGAGCCCT TTATCATCCA GGTGAATAAC AAAGACTTTG TCGTAGTGCC TTATACCTTA
CGCAACAATG ACATTGTACT GGTATCCGGT CAATGGTATT CGAGCGATCA GTTCCTGCAG
CAGGTGAAAA TGGAGTTTGA TCAGTTGTAC GAGGAATCCG CCAATCGGAG AAGGATGATG
TCCGTTAGCT TCCATGACCG TATCGGCGGT ACGCCACAGA TGGTAAAGGC AGCAACCGAA
CTGTTTACCT ATATGCAGCA ACATAAAGGC GTGACATTCA GGAGAAAAGA CGATATCGCA
CGGATGGCAT TGAGTGACAA AACCACTATC AGGGAATAG
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| Protein sequence | MATRKEFLKT AGLLGMAGMI GPASLVAAPA QQKKPASSWI DGSRLVVSVS MQFEAGGQPV
NAESPFPQNM VKGYKDLPSE TWYQYGYKEG IPRMLDTWDK LGIKVTSHMV GSAVLKNPSL
AKEIVQRGHE AAAHGRDWAT QYTMSYEEER KFIQDGVDAV KQVTGMTPKG YNANWLRRGE
HTLQILQELG FTYHIDDLSR DEPFIIQVNN KDFVVVPYTL RNNDIVLVSG QWYSSDQFLQ
QVKMEFDQLY EESANRRRMM SVSFHDRIGG TPQMVKAATE LFTYMQQHKG VTFRRKDDIA
RMALSDKTTI RE
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