Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4074 |
Symbol | |
ID | 8360247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5068138 |
End bp | 5069004 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966246 |
Product | protein of unknown function zinc metallopeptidase putative |
Protein accession | YP_003123735 |
Protein GI | 256423082 |
COG category | [R] General function prediction only |
COG ID | [COG2321] Predicted metalloprotease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.126903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.130895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGGC AAAACAGAAG ATTAAGCGAT AACGTAGAAG ACCGTCGTGG TGGCGGCGGT GGTGGTGGAA TGAGAAACAT CGGCATCGGT GGTGGTATCG GTGGTATCAT TATCATTGTT CTGGCCTTGT TATTCAACCA GGATCCCCAA CAGGCTTTGC AATCCGTTCA GCAAGGTACC GGCGGTGCCC AGCAGACAGA ATCCAAAACC GTTACCAACA ACAGCGACGA GATTGCCCGG TTTGCATCGA CAGTCCTGGC AGATACGGAA GACGTTTGGG AAAAGCTGTT TGCCGAAATG AACAAGCAAT ACAAAGATCC GGGTATGGTA TTGTATACCG ACTATGACCA GTCCGGCTGT GGTGCAGCGC AATCTGCTAT GGGACCTTTT TATTGTCCTG CGGATGAGAA AGTTTATCTT GACCTGAGCT TCTTCAATGA AATGGAACAG CGCTTCAAAG TAGCAGGCGA TTTCGCTATG GCTTACGTCA TTGCACATGA AGTTGGTCAT CACGTACAGA ACCTCCTTGG CACCAGTCGC AAGGTACAGG CGATGCGTTC TCAGATAAGC GAGCGTGAAT ACAATAAATT ATCCGTTAAA CTTGAGTTAC AGGCGGATTT CCTTGCTGGT GTATGGGCGC ATCATGCACA GAAGATGCAG AACATCCTTG AAGCAGGTGA CATTGAAGAA GCTTTGAATG CTGCCAGTGC TGTTGGCGAC GATGCATTGC AAAAAGCGGC TTCCGGGCAT GTTGTTCCGG ATGCTTTCAC GCATGGTACA TCTGCGCAGC GTATGAAGTG GTTTAAGAAA GGTTTTGAGA CCGGTGATGT CAAACAAGGT GACACTTTCA ATACGACAGA TCTTTAA
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Protein sequence | MRWQNRRLSD NVEDRRGGGG GGGMRNIGIG GGIGGIIIIV LALLFNQDPQ QALQSVQQGT GGAQQTESKT VTNNSDEIAR FASTVLADTE DVWEKLFAEM NKQYKDPGMV LYTDYDQSGC GAAQSAMGPF YCPADEKVYL DLSFFNEMEQ RFKVAGDFAM AYVIAHEVGH HVQNLLGTSR KVQAMRSQIS EREYNKLSVK LELQADFLAG VWAHHAQKMQ NILEAGDIEE ALNAASAVGD DALQKAASGH VVPDAFTHGT SAQRMKWFKK GFETGDVKQG DTFNTTDL
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