| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4071 |
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| Symbol | |
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| ID | 8360244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5062318 |
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| End bp | 5064240 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966243 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123732 |
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| Protein GI | 256423079 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.184175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0840228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTC CGGAAGAGGA TACCTTGTTC CCGATACTCC CGATGATACC CACGGTACCC
ATCGTACCGA CGATCCCGGG AGACACGATC GTTCCAGGGG ACGTCATTTT ACAGGGGGAT
ACCGTTCCGG TCTCCAAGAA ATATTCAAAT TCCTGGTTCA ACCGTATGCG GGTATATCAG
GACTCACTCC GTAGCAGGCA ATACCGGAAT ACCCTTATCA GAAAGGTGAC CCGTCAGGAT
GTACCGGAGC CTTCCGGTAC GGATAGCAGT ATTATCAAGA GTGAACAGTA CTTCAAGCCC
TTCAGCGGAA AAGTGATCAG AGATATCTAT TTCCGTCGGG TAAACGTATT TGGTCCCAGC
AATATCAAGG ATACGACTTT TTCCACCTCT ATGAAACTGG TGCACCTGGC CAACCGCCTG
CACTTCAATT CGGAGGAATG GGTGATCCGG CAATTGTTGT TTTTCCAGCA GAATGATACA
CTCAATCCAT ATGAAATGTC GGATAATGAG CGTTATCTGC GTAGCCGACC CTTCATTCAG
GATGCCCGCT TATATATTAT TAATACAGGT CCATCCCCGG ATTCCATCGA CCTCCTGGTA
GTGACCAAAG ACGTATTTGA ATACGGTTTC GACCTGTCGA GGCTCAGTAC CTCGGGTATC
AGGGCCAGTG TATCCAATGA TAACCTTTTT GGTGCTGGTC AGGGTGTCAA GATAGGTGGA
TCCTGGAGTG GTAACGATAA TCCGCCTTTT GGTTCGCAGG CACGATACAC AAAAAACAAC
ATCCTGGGCT CCTTTATTGA CTTCTCCGGC GGATATACCA CCCTTAATAA TATTAATACC
CTGGACTCGG GTACTTACGA GGGAACTTAC TACTTTGCTT TTGACAGACC TTTATATAAA
AGCGGGGCCA AGTGGACGGG AGGCATCGGT TTCAGCAGCA ACTACTCTAT TAATATGTTC
AACCGGCCGG ATACGCTGTA CCGTGACTAC CGGTATAATA TCCTGGACAT CTGGGGTGGT
TATAACATCC TGAAACAGGA CAGCCGCAAT CCTGGTTCGC GCAGACCCAA TCTGGCATTT
CTGGTCCGGC ATTTTAATCT GCTCTTTACC CAACGACCCT GGCAGGAGGA ATATAAGTTA
GATCCTGTAT ATAATAACCA CCGCTTTTAC CTGGCCCAGG CAGTCGTCTT TCGGCAAGAG
TTTTTCAAAA CGGATCATTT CTTCGGATTT GGCAGAACAG AGGATATTCC GCTGGGTTAT
ACCGCATCGG CTACTGCCGG TTGGGAGACC TGGAAGGGTA GGACCAGGGG CTATGTCGGA
CTGGAAGCAG AGAAATTCTG GGTAACCGGT TCAAAGGGGA TTATCTATGG ACAGGCAGGG
ATCAGCACTT TTTATCAGAA CTACGCTTCA GAGGATGCGA TCCTCCATGC GAAAATAGAA
TACTACAGCC GCGCCTTCCG GTTTGCCGGA GGAAAGCTGC GTCAGTTCCT ATACTTTGAT
TATCTGGGAA ATCTGAATAA TTACTTTTAC AGACCACTGA ATATCAACCG TGATCTTGGC
GTATGGGGCT ATAAGAACGT TCCCCTGAGC GGATATCAAA GATTAAATGT GCGTTCGGAG
ACGATTTATT ATAGTCCGCT GAAATTACTG GGCTTCAAAT TTAACTTCTT TACCTCCGTC
CAGGCATCCC AGCTTTCCAT TAAAAGCAGC AATCTGTTTA AAAACCCGAT ATATTCCGGC
CTGGGCCTGG GATTCAGGTT AAGGAACGAA AACCTCTCGC TGAATACCCT GCGGCTGTCG
GCCAATTATT ATCCGAATGC GCCATATCCG ATGCAGACTG TATTCTGGGA AGCGACTACA
GTAGTCGACT TCCGTTTCAA CATCTTCTCA CTCAGGGCGC CGGCATTTTT ACAGTTCAGA
TGA
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| Protein sequence | MPVPEEDTLF PILPMIPTVP IVPTIPGDTI VPGDVILQGD TVPVSKKYSN SWFNRMRVYQ
DSLRSRQYRN TLIRKVTRQD VPEPSGTDSS IIKSEQYFKP FSGKVIRDIY FRRVNVFGPS
NIKDTTFSTS MKLVHLANRL HFNSEEWVIR QLLFFQQNDT LNPYEMSDNE RYLRSRPFIQ
DARLYIINTG PSPDSIDLLV VTKDVFEYGF DLSRLSTSGI RASVSNDNLF GAGQGVKIGG
SWSGNDNPPF GSQARYTKNN ILGSFIDFSG GYTTLNNINT LDSGTYEGTY YFAFDRPLYK
SGAKWTGGIG FSSNYSINMF NRPDTLYRDY RYNILDIWGG YNILKQDSRN PGSRRPNLAF
LVRHFNLLFT QRPWQEEYKL DPVYNNHRFY LAQAVVFRQE FFKTDHFFGF GRTEDIPLGY
TASATAGWET WKGRTRGYVG LEAEKFWVTG SKGIIYGQAG ISTFYQNYAS EDAILHAKIE
YYSRAFRFAG GKLRQFLYFD YLGNLNNYFY RPLNINRDLG VWGYKNVPLS GYQRLNVRSE
TIYYSPLKLL GFKFNFFTSV QASQLSIKSS NLFKNPIYSG LGLGFRLRNE NLSLNTLRLS
ANYYPNAPYP MQTVFWEATT VVDFRFNIFS LRAPAFLQFR
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