| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4038 |
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| Symbol | |
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| ID | 8360211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5023764 |
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| End bp | 5024504 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966211 |
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| Product | protein of unknown function DUF178 |
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| Protein accession | YP_003123700 |
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| Protein GI | 256423047 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1427] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.063784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAACGGA AAGTAAAAGT AGCGGCAGTA AGTTATTTGA ATACCAGGCC ATTATTGTAC
GGATTCAGGG ATCATCCCGT GATGAATATG CTGGAACTGA GTGCTGATTA TCCTGCTAAA
ATTGCACAGC AACTGATTGA TGGAGAAGTA GATGTGGCGC TCGTGCCAGT AGCGACCATC
CCTAAACTGC AAGAATATCA TATCATTTCT GATTTTTGTA TTGGTGCGGA AGGTCCGGTA
GCTTCTGTTT GTCTTTTCAG CGAAGTTCCC CTTAATGAAA TAAAACGTAT CTATCTCGAT
TATCAGAGCC GTACCTCAGT CGCCTTGCTG AAAGTACTGG TGCGTGAACA CTGGAAACTG
GATGTTGAAC TGATCGAGAC TAACGGCGAT TACGAAGATA AGATCAATGG TACCGACGCC
GGACTGGTGA TTGGCGACCG TGCACTCGAA CAGCGACATG TGTCTCCTTA TATATATGAC
CTCGCTGAGC ATTGGATGAG ATTTACCAGT CTGCCTTTTG TATTTGCCGC CTGGATCAGC
AACAAACCCT TACCGGCAGA GTTTATCCAG CAGTTTAACA ATGCCAACAG TCTCGGTATT
CATAATATAC CGGCTGTTGT AGCAGAGAAT CCTTATCCGC TGTACGATCT TACAACGTAT
TACACGCAGA ATATCAGTTA CCCGCTGACG CCGTCTAAAC GACAGGGCTT ACAAAGGTTT
CTTGGGTTTC TGATGAAATA G
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| Protein sequence | MERKVKVAAV SYLNTRPLLY GFRDHPVMNM LELSADYPAK IAQQLIDGEV DVALVPVATI
PKLQEYHIIS DFCIGAEGPV ASVCLFSEVP LNEIKRIYLD YQSRTSVALL KVLVREHWKL
DVELIETNGD YEDKINGTDA GLVIGDRALE QRHVSPYIYD LAEHWMRFTS LPFVFAAWIS
NKPLPAEFIQ QFNNANSLGI HNIPAVVAEN PYPLYDLTTY YTQNISYPLT PSKRQGLQRF
LGFLMK
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