| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3983 |
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| Symbol | |
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| ID | 8360156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4955510 |
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| End bp | 4956877 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966157 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003123646 |
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| Protein GI | 256422993 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.462123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACTG CCATCATGAA AAGAAAAACG TTCATAATAC TAATGGCTAT TATGTGGACG
TCCGCGCAGC AAGGATCTGC GCAGAGCAAG GTGCTGGATG ACTATATTCA GAGCGCTTTT
GCACAGAATC AGGGGCTGAA ACAGCAGCAT TTCCAGCTGG ATAAATCACT TTACGCATTA
CAGGAGGCCA AAAGCCTGTT CTACCCACAG GTAGGACTCA CCGGCAACTA TACAAAAGCA
GGCGGCGGCC GTACCATTGA TATTCCGATT GGCGACCTGC TCAACCCGGC TTATAGCGCC
CTGAACCAGC TAACCAACTC CTCCAAATTC CCACAGCTGG AAAATCAGTC CATACTACTC
AACCCGGACA ACTTTTATGA CGTACACCTT CGCACGACCC TCCCGCTGGT CAATACCGAA
ATATGGTACG CACAAAAGAT CCGCCGCGAA AATATCAGTC TCCAGCAGGC AGGTGTAAAC
GTCTATAAAC GCCGGCTCGT CAGAGACATT AAAACAGCTT ACTATCAATA CTACCAGGCC
GGGAAAGCAG TGGACATCTA CAATACCGCA CGCTCACAGG TGCAGGAGAA TATCCGGGTG
AACACCAGCT TCCTGACCAA TGGTGTAACC AATAGCACCG CCCTTACCCG CGCCAAAGCA
GAATTGCAGC GTATTGAAGC CTCCATCACA GAAGCAGAAA ACAAAAAACG GAACGCCGGA
GCCTACTTTA ACTTCCTGCT GAACAGAGAC CTGAAATCAG GCATCATACT CGACAGTACC
ATCTTCCTGT CGCAGGAAAT CTCCTCCGCA CCCACCGGTA CCTCCAATGT CAGGGAAGAA
TTACAACAAC TCTCCCGGCA ACAAAAAATA GCAGACCTTA CCTATCGCCA GTCAAAGTCT
TATCTCGTAC CGAAACTCAG CACCTTCCTG GATCTCGGTT CACAGGACTT CAACTTCAAA
GTAAACAGTC AGTCCAGGTA TTACATGTGG GGCGTAAACC TGCAATGGGA CCTCTTTGCT
GCCGGACAAC GCAAATACAA AGCACAACAG GCAGCGATCG ATGTAAGCAA CATCCAGGCG
GCTTACAATG AAGCCAGTCT CTCCTTCCAG CTGGAACAAC AGACGGCAGA AAACAATTAC
CACACCGCTG TAGCCAATTT TAACAGCGCA CACGAACAAT TACAACTCTC CGAAAAATAT
TACAATGACC AGTCCAAGGT CTATAAAGCA GGACAGCTGC TCTATATAGA ATTGCTGGAT
GCCCAGAACC AGCTGACCAA CGCGCGTCTG CAACTTTCCG TGGCCTTCGC AGCAGTACAA
ACAGCGCTCG CAGATATCGA ACGCGCACAA GCTTCCTATA AACTTTAA
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| Protein sequence | MSTAIMKRKT FIILMAIMWT SAQQGSAQSK VLDDYIQSAF AQNQGLKQQH FQLDKSLYAL
QEAKSLFYPQ VGLTGNYTKA GGGRTIDIPI GDLLNPAYSA LNQLTNSSKF PQLENQSILL
NPDNFYDVHL RTTLPLVNTE IWYAQKIRRE NISLQQAGVN VYKRRLVRDI KTAYYQYYQA
GKAVDIYNTA RSQVQENIRV NTSFLTNGVT NSTALTRAKA ELQRIEASIT EAENKKRNAG
AYFNFLLNRD LKSGIILDST IFLSQEISSA PTGTSNVREE LQQLSRQQKI ADLTYRQSKS
YLVPKLSTFL DLGSQDFNFK VNSQSRYYMW GVNLQWDLFA AGQRKYKAQQ AAIDVSNIQA
AYNEASLSFQ LEQQTAENNY HTAVANFNSA HEQLQLSEKY YNDQSKVYKA GQLLYIELLD
AQNQLTNARL QLSVAFAAVQ TALADIERAQ ASYKL
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