Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3961 |
Symbol | |
ID | 8360134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4926361 |
End bp | 4927788 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966135 |
Product | histidine kinase |
Protein accession | YP_003123624 |
Protein GI | 256422971 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.321682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0949422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTTATA AATATTCGCA TTTAAACGTA GACCTTTGCA TAACTTATCG ATTATCAGCA TATACTAATA AAAACCAGCA TTTGCACAAA ATTGCACGTA ATCTAGCCAA CATTTGGGAA GAACTGGTAG GGGACCCTGC GTCGTTCTCA CTGGAGAACC GTGCCTTCAA CTCAATCAGT GTGGTAACCA TGACATTACT GACGGTATTA CTGCCGTTCA ACATGTGGCT CGGTCTTACC TTCGTATGGG TCATCGTAGC GACCCTGCTG GTGTTACAGG TCTTTTTCTT TTACCTCTCC CGTTATAAAA AGGTCTACCA TGTCAGCATG CTGGCCTACG CGATTGTCAG CTACATAACA CTGACAGCCA CCTTTTACCT GAATTCCGGT AGCCATGGCC CTGCCCTGCT GCTGTTTTTC CTGACTTTCA ACCTGCTGAT CGCTTTCAGT CCGCGAAGCC GTCACTGGAT ATGGGCCTGC CTGCACCTGC TGCTGCCGGT CATCCTCCTG ACAAAAGAAT ATATTAATCC AGCCTGGATC AAAGATAGTT ACACCAGTGC TGAGTACAGA TACGTGGATA TCCTGTCCAG TTACCTGATC ACGCTAACCT GCATATATCT CATTACCAAT TATTTAAGAA ATAATTACGA AAGAGAAAAG CGCAATGCCG AAGAACGGGC AGATAAAATT GATAGCCAGA ATATCAAACT GGAACAATCC AACCAGAAAA AGGATAAGCT GTTCTCAATT ATCGCGCATG ACCTGCAAAG TCCGCTGAAC TCCATCATTA CCACCCTGCA CCTGATCGCA GAATACGACC TGGAAGAAGA GGAAAAAAAG ATGTTAGGGG ATGAATTGCT GACCCTGACT AAAAATACGT CCAGTCTGCT GACGAATCTT CTCACCTGGT CGAAATTGCA GATGGATGGA AAAGGTGTCA GACTATCCGC AGAAAATGTC CATGAAGCAG TAGAAAGAGT GCTGACCATT CAACGCCTGC TGGCTGAAAA AAAAGCCGTC AGCATCACCT CCCGCGTAGA CCCGGATGTC TATATTACCG CGGATCATAA CATGCTGGAA CTGATTATCA GAAACCTGGT GAATAATGCG ATTAAATTCA CCCCTTCCGG TGGACAAATC GCCATTGACA TCCGTCTCAT TGAGGAATAC TGCCACCTGA TGATCTCTGA TAATGGCATC GGTATAGATC CCAGCCATCA CGATGAAATA TTCTCCCTGA AAACACAATC TACCTTCGGT ACCAACAACG AAAAAGGTAT CGGCCTCGGA TTAGTACTTT GTAAAGAATT ACTCGCACTA CAGAATGGCG AATTATGGTT TGAAAGTATG CCCGGCGAAG GCACCACCTT TTTTGCCAGC TTCCCGCTTA GCCAGATGAA GGTTACCGGC AGTACACTAT CAGCGTAA
|
Protein sequence | MCYKYSHLNV DLCITYRLSA YTNKNQHLHK IARNLANIWE ELVGDPASFS LENRAFNSIS VVTMTLLTVL LPFNMWLGLT FVWVIVATLL VLQVFFFYLS RYKKVYHVSM LAYAIVSYIT LTATFYLNSG SHGPALLLFF LTFNLLIAFS PRSRHWIWAC LHLLLPVILL TKEYINPAWI KDSYTSAEYR YVDILSSYLI TLTCIYLITN YLRNNYEREK RNAEERADKI DSQNIKLEQS NQKKDKLFSI IAHDLQSPLN SIITTLHLIA EYDLEEEEKK MLGDELLTLT KNTSSLLTNL LTWSKLQMDG KGVRLSAENV HEAVERVLTI QRLLAEKKAV SITSRVDPDV YITADHNMLE LIIRNLVNNA IKFTPSGGQI AIDIRLIEEY CHLMISDNGI GIDPSHHDEI FSLKTQSTFG TNNEKGIGLG LVLCKELLAL QNGELWFESM PGEGTTFFAS FPLSQMKVTG STLSA
|
| |