Gene Cpin_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3931 
Symbol 
ID8360104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4881633 
End bp4882421 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID644966105 
Producthypothetical protein 
Protein accessionYP_003123594 
Protein GI256422941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.543467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0451042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA AAAATAACAC CAAAATATAT GGCAGGGAAG AGCTGAAGGA GCATTTCCGC 
AATGGGAAAC TGCCCACAGA GCACCACTTC GCACACCTGA TTGATTCTAC TATCAATAAA
CAGGAAGACG GCTTTTCGAA AGACGAAGAG AACGGGATGC TGGTGGCCGC ATTGGGCAGT
TCTAAACGCC TGGTGTCTTT CTATCGTACC AACGATGACC TGGAACCTTT CTTTCTGATG
GAGAAAGACG AGCGGGAGAA TCCCGGTTTC CGGATGCAGC CGCATACCAA TGGGGCCGAT
GAACCTTCCA CAGATGCCAG GAGCTTCTTC CTGCATCAGA ACGGAAATAT GGGCGTAGGT
ACCCGGTGTA ACCCCTGTTA TAAAATGGAG GTAACCGGTT TCATTGCCAT GGAAGGAAGG
GTAGGTACCT ACCGGATAGG GAAGGTGCCT GCGGATGGGA AGTGGCATGA GATTATCGGC
GGACTGGATA ACTGTCAGGC ATTTGAAGTG ATTGCCAGAA CCGGCCGACG TAACTCCGGC
CGTTTTGCCA TTATGCACGC CTATGCGGTA AGCGCTTTTA ATAAATGGTC CTGGGGAAGG
ATCAGGAAGA CTTCTGCACA TTATGGTTTC TTCTGGAACC GCCTGCGTTT GCGCTGGAAA
GGAAGTACCC ATCATTATGG CTTACAGCTG CGTACCAACA GCAATTATGG ACCTGATGTA
GAAATCTATT ACCGTATCAC CCGTCTCTGG GACGATACCG CATTTATGCC GAAGGAATAC
TACCACTAA
 
Protein sequence
MATKNNTKIY GREELKEHFR NGKLPTEHHF AHLIDSTINK QEDGFSKDEE NGMLVAALGS 
SKRLVSFYRT NDDLEPFFLM EKDERENPGF RMQPHTNGAD EPSTDARSFF LHQNGNMGVG
TRCNPCYKME VTGFIAMEGR VGTYRIGKVP ADGKWHEIIG GLDNCQAFEV IARTGRRNSG
RFAIMHAYAV SAFNKWSWGR IRKTSAHYGF FWNRLRLRWK GSTHHYGLQL RTNSNYGPDV
EIYYRITRLW DDTAFMPKEY YH