Gene Cpin_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3923 
Symbol 
ID8360096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4873529 
End bp4873984 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content45% 
IMG OID644966097 
Producthypothetical protein 
Protein accessionYP_003123586 
Protein GI256422933 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000169175 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00880657 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGATG ACGGCTCTAC CCAGGCCCAG TCCACGTGGC CTCTTGTCAA ATTTTCGTTC 
AAGGTCATGT GGGACGGTGC TGAACTGATA TTCCAGGAAG TAACCGGATT ATCTTCAGAA
ACCCAGATCA TAGAATACCG TGGTGGCAGC AGCCCTGTTT ATTCAACGGT GAAAATGCCC
GGTATCCAGA AATTCTCCAA CGTTACTCTC AAGAAAGGTA TTTTCAAAGG AGACAAAGCG
CTGTGGGATA AGTATAAAGG TATCACCATG AATACCTACA AACGTATCAA TATCGTTGTG
AGCCTGCTCG ATGAGAAACA GGATATCGCA ATGAGCTGGA CGCTGAAGAA TGCATTCCCA
TGCAAGATCA CAGTGACTGA CATGAAATCT GACGCTAACG AAATAGCTGT AGAAACTATG
GAAGTAGCGC ATGAAGGTTT AACCATTTCT GAATAA
 
Protein sequence
MADDGSTQAQ STWPLVKFSF KVMWDGAELI FQEVTGLSSE TQIIEYRGGS SPVYSTVKMP 
GIQKFSNVTL KKGIFKGDKA LWDKYKGITM NTYKRINIVV SLLDEKQDIA MSWTLKNAFP
CKITVTDMKS DANEIAVETM EVAHEGLTIS E