Gene Cpin_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3916 
Symbol 
ID8360089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4866466 
End bp4866927 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content44% 
IMG OID644966090 
Producthypothetical protein 
Protein accessionYP_003123579 
Protein GI256422926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00240375 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00943034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACATC TCATTTTCAT TTTCTTATTG GGAACCGGTA TCGCCACTTA TGCGCAGAAA 
AGCGATCAAC CGGTCAATGT ACCTGCCGCC GTTACCAAAA GTTTTCAGCA GCAGTTTCCC
GCTGCAACAG GTGTTAAATG GAAGTTGAAA GATAACCAGT ACAAAGCCGA GTTTCACAAA
CATGACGTTT GGTACGACGC CAGCGGTAAA CTGGTAAAAC AGAAGGAAGA CATCAAAGAC
GCAGATCTGC CTGCTGCCGT TAAACAGGCC GTTCAGCAGC AATTTGCCGG ATATACTATC
CATGACGTTG ACAAACACAC TGCCGGCAGC GCTGTTACCT ATAAGGTAGA ACTGCAGAAG
AAACCGGAAG AAAGAAAGGT AACTTTCAGC CCTGATGGTA AAGTACTGGA AAACGTACTG
GATAAGAAAG ATAAGAAAGA CAAAAAAGAA GGGAAGAAGT AA
 
Protein sequence
MKHLIFIFLL GTGIATYAQK SDQPVNVPAA VTKSFQQQFP AATGVKWKLK DNQYKAEFHK 
HDVWYDASGK LVKQKEDIKD ADLPAAVKQA VQQQFAGYTI HDVDKHTAGS AVTYKVELQK
KPEERKVTFS PDGKVLENVL DKKDKKDKKE GKK