Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3907 |
Symbol | |
ID | 8360080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4860931 |
End bp | 4861338 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644966081 |
Product | hypothetical protein |
Protein accession | YP_003123570 |
Protein GI | 256422917 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.284042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00232908 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCATTTA CTCCGGATTC GGTTTTAGTA AGAAGCGCAA TAGTTAGCCC TGTAGACTTT CTGGTCCCGG GTACTACCTT TTTGTTCAGT ATCCCTCAAG GATACATTTT TACCGCTGTT GCAGGCGCTC AGTTAACAAT AGTGGATTCG GCTGGAACTG GTGTAGGCGT CTTTAGTGTA AGTGCAGGGA CCAATGCTAC ATCATACAAT AACCTTTATA GTTCATTGAG TCCTAGTTTG GCGCAACTGA CTGGCAACAC GGTGATTCCT CTAACTGCAC AACCTAGGGC TGTAAATGCA ACCTCTGGAT CAGTAAATAT TTATATCAGC ATAGTAGGGA TAGCCACAGG ATTCACGACA CTGAAAGGTA TATTCTATAT GCCATACGCT TTAATCAAAT ACCCATAA
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Protein sequence | MAFTPDSVLV RSAIVSPVDF LVPGTTFLFS IPQGYIFTAV AGAQLTIVDS AGTGVGVFSV SAGTNATSYN NLYSSLSPSL AQLTGNTVIP LTAQPRAVNA TSGSVNIYIS IVGIATGFTT LKGIFYMPYA LIKYP
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