Gene Cpin_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3907 
Symbol 
ID8360080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4860931 
End bp4861338 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content43% 
IMG OID644966081 
Producthypothetical protein 
Protein accessionYP_003123570 
Protein GI256422917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.284042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00232908 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCATTTA CTCCGGATTC GGTTTTAGTA AGAAGCGCAA TAGTTAGCCC TGTAGACTTT 
CTGGTCCCGG GTACTACCTT TTTGTTCAGT ATCCCTCAAG GATACATTTT TACCGCTGTT
GCAGGCGCTC AGTTAACAAT AGTGGATTCG GCTGGAACTG GTGTAGGCGT CTTTAGTGTA
AGTGCAGGGA CCAATGCTAC ATCATACAAT AACCTTTATA GTTCATTGAG TCCTAGTTTG
GCGCAACTGA CTGGCAACAC GGTGATTCCT CTAACTGCAC AACCTAGGGC TGTAAATGCA
ACCTCTGGAT CAGTAAATAT TTATATCAGC ATAGTAGGGA TAGCCACAGG ATTCACGACA
CTGAAAGGTA TATTCTATAT GCCATACGCT TTAATCAAAT ACCCATAA
 
Protein sequence
MAFTPDSVLV RSAIVSPVDF LVPGTTFLFS IPQGYIFTAV AGAQLTIVDS AGTGVGVFSV 
SAGTNATSYN NLYSSLSPSL AQLTGNTVIP LTAQPRAVNA TSGSVNIYIS IVGIATGFTT
LKGIFYMPYA LIKYP