Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3895 |
Symbol | |
ID | 8360068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4847496 |
End bp | 4847834 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644966069 |
Product | phage head-tail adaptor |
Protein accession | YP_003123558 |
Protein GI | 256422905 |
COG category | [R] General function prediction only |
COG ID | [COG5614] Bacteriophage head-tail adaptor |
TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0300067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAGA TAAAACCGCA GGGGCAGTTT AACCGCCGTA TCCAGGCGCA GAAGCTCTCA GTGACACAGA ACGAAGCTGG AGGAATGGTT GAAACTTGGT CGTCTTTGTT TGAAACATGG GCATACGTAG GACCGGTTAA ATCCTGGCGG CATTTGGAGA TTATGAAGAA TACACAAAGC GCATCCTACG AAGTCCAGAT CAGATATACT CCGAGTAGAC AGATTGATAA TAATGTGCGA TTTGTTTATG AAGGCAAGGT ATTGGTCATA AACAGTATAG AAGAAGATGT GGAAGGCAAC AAACGGTTTT ACGTACTCAT ATTAACAGAG CAAGTGTAA
|
Protein sequence | MSKIKPQGQF NRRIQAQKLS VTQNEAGGMV ETWSSLFETW AYVGPVKSWR HLEIMKNTQS ASYEVQIRYT PSRQIDNNVR FVYEGKVLVI NSIEEDVEGN KRFYVLILTE QV
|
| |