Gene Cpin_3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3851 
Symbol 
ID8360023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4822160 
End bp4823017 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID644966024 
Producthypothetical protein 
Protein accessionYP_003123514 
Protein GI256422861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0385254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.135456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGA TAAGAACTAT AAAACCAGAC TTTTTTAAGA ATGAGGAGTT AGCTGAGCTT 
CCGGCCATGG TTAGATTACT CTTCATCGGT TTGTGGACAT TGGCAGACAG AGAGGGAAGA
ATGCATGATC GCCCCAAGAG GATAAAGGCA GAAATCTTTC CTTACGACAA CGTGAACATT
GAAAACGATC TGGCACGGCT TCAAAGTGCA GGCTTCATTG AAAGATATGA AGTTGGCGAA
ATGAAAGTGA TTCAGGTGAA CAATTTCACG AAACACCAGA GGATTACCGG CTCCGAAGCG
CTTTCCCATA GCGAATTTCC AGCCCCTCAG ACCGCCGCTC AAGAGAGCGA GAAACAGGGA
GGAAACACTG AGGAAACATT TGGAAACACC GAGGAAACGC CTAGGACGAC AGGAAAGGAA
AGGAAAGGAA AGGAAGGGAA GGGAGTGTAT CGCGCGCAAG AAATTCCAGA AAGAGAGGCT
GATGAACTTA AAGACCAAAG CGAAGCTAAT GCCCCCCCGG TTCCGCCGCC CCCCCCGCCG
CGCCAAAACA AAGGACCGTG TATCGAAGCG GTATTGGAAT TCTTCCGCCG CGCCGGTGGC
ACCGAAGAGA TGGCTCACGG GTTTTGGAAC AAATGGGAAA GCGTAAACTG GATGAATGGC
ATGTCTCCAA TAGCGCAATG GCCACCCTTG GCTAATAATT ACATCGCCAG TTGGCATCGT
AACGACGAAC AAAAAGCTAA GTCTCATGGA TCAGGAAGAA AGCAAACAGT TACGGGAAGC
ATCGAAGCAA TTGACGCCGC TACTGCTGAC ATCATCAGAG ATTTGGATGA AGCAGCACGC
CTCCAGCGAT CGGATTAA
 
Protein sequence
MARIRTIKPD FFKNEELAEL PAMVRLLFIG LWTLADREGR MHDRPKRIKA EIFPYDNVNI 
ENDLARLQSA GFIERYEVGE MKVIQVNNFT KHQRITGSEA LSHSEFPAPQ TAAQESEKQG
GNTEETFGNT EETPRTTGKE RKGKEGKGVY RAQEIPEREA DELKDQSEAN APPVPPPPPP
RQNKGPCIEA VLEFFRRAGG TEEMAHGFWN KWESVNWMNG MSPIAQWPPL ANNYIASWHR
NDEQKAKSHG SGRKQTVTGS IEAIDAATAD IIRDLDEAAR LQRSD