| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3787 |
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| Symbol | |
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| ID | 8359957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4764545 |
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| End bp | 4765441 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644965958 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123450 |
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| Protein GI | 256422797 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0143656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA TCGTTAAAAT TGGCAGCGTC GCGCAATACA ATGCCATGCG AGGTGTAACT
ACCAAACATC CCCTGATTAC GGTGATTGAC CTCTCGATTG CGCAACCGAT GCCCGCCAGG
TCATTTAACT TTGGTTTGTA TGCAGTGGGG CTGAAAGAAA TAAACTGTGG CCAGTTGCGC
TATGGAAGAA AGCACTATGA CTACCAGGAA GGAAGTCTGA TATTTGTAGC GCCAGGACAG
GTTGTGGGTG TGGAACGCGG CGTTGAACCA TTTGCCATGA AAGGATGGGT ATTGCTCTTC
CATCCCGACC TGATAAACGG CACGCCATTG GGCAAACACA TGCAGGATTA TTCTTTCTTT
TCGTATGATG TCAATGAAGC GCTTCATCTG TCGGATAAAG AGAAAAGTAT TGTGATTGAT
TGCTTCTCAA AAATCGAGTA TGAACTCGAT CAAAATATAG ACAAGCATAG TAAAGGACTG
ATTGCATCCA ACATCGAGTT ACTGCTCAAT TATTGCAACC GTTTTTATGA CCGGCAGTTC
ATTACGCGCG ACAATGCAAA CAAAGGCATC CTGGAACGGT TTGAACACTT ATTGAAAGAC
TATTTTTCAT CTGATAAACC GCAGCACGAA GGTTTACCTT CCGTGGCTTA TTGTGCCGAA
GCGCTACATT TATCCCCCAA TTATTTTGGT GATCTGGTGA AGAAAGAAAC CGGCAGATCT
GCGCAGGAGT ACATTCAATC AAAAGTGATA GATGTGGCGA AAGAGAGAGT GTTTGATCTG
AATAAATCTG TAAGTGAAAT TGCGTACGAA TTAGGCTTTA AATATCCGCA GCATTTCACC
CGTTTATTTA AACAAAAAGT AGGCATTACG CCGAATGACT ATCGGATGAT GAATTAA
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| Protein sequence | MEEIVKIGSV AQYNAMRGVT TKHPLITVID LSIAQPMPAR SFNFGLYAVG LKEINCGQLR
YGRKHYDYQE GSLIFVAPGQ VVGVERGVEP FAMKGWVLLF HPDLINGTPL GKHMQDYSFF
SYDVNEALHL SDKEKSIVID CFSKIEYELD QNIDKHSKGL IASNIELLLN YCNRFYDRQF
ITRDNANKGI LERFEHLLKD YFSSDKPQHE GLPSVAYCAE ALHLSPNYFG DLVKKETGRS
AQEYIQSKVI DVAKERVFDL NKSVSEIAYE LGFKYPQHFT RLFKQKVGIT PNDYRMMN
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