Gene Cpin_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3786 
Symbol 
ID8359956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4763411 
End bp4764394 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID644965957 
Productaldo/keto reductase 
Protein accessionYP_003123449 
Protein GI256422796 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.530664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0153976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC GACAATTAGG AATCTCAGGA TTAGAAGTCT CCGAACTTGG CTTCGGCTGC 
ATGGGATTAA GCCATGGGTA CGGTCCGGCA ACAAATGAAA ACGATGCCAT TGCACTCATT
CAAAAAGCTT ATGAATCGGG CATCACTTTC TTTGATACCG CAGAAGTATA CGGACAAGGC
GCCAATGAAC AACTGGTAGG AAAAGCATTA CACGGTGTAC GTGACAAAGT AATCATCGCT
ACCAAGTTTG GCTTTAAAAA CGGCAGAAAT ACAGATGGTT TGAACAGTCG CCCGGAACGC
ATCCGGCAGG TGGCGGAAAA CTCGCTCCGG TATCTGCAAA CTGATTATAT CGATTTGTTT
TATCAACACC GTGTAGACCC GGATGTACCC ATTGAAGATG TCGCCGGAAC TGTAAAAGAT
TTAATTGCCG AAGGCAAAGT AAAACACTTC GGTATGAGTG AAGCCGGCCT GCAGAGCATA
CGCAGGGCGC ATGCCGTACA GCCCCTGGCA GCCCTGCAAA GCGAATACTC TATGTTCTGG
CGTGAACCTG AACATGAAAT CATTCCATTG CTTGAAGAAT TAGGCATTGG CTTCGTCCCG
TTTAGCCCGC TCGGCAAAGG ATTTTTAACT GGTAAGATGA ATGCAGACAC CGAATTTGAC
AAGACCGACT GGAGAAATGT CATGCCTCGT TTTTCCAAAG AAAATCGCCA GGCCAATCTA
ACCATTGTTG ACCTTGTCAC AAAGATTGCG GGAGAACATA ACGCAACGCC AGCGCAGATC
GCATTGGCAT GGCTGCTGGC GCAGAAGCCA TGGATTGTAC CGATTCCCGG AACCACAAAA
ATGGCTCGCT TAGCAGAAAA TATAGGCGGT GCAAATATCT CCTTGGGCGA TGATGATATA
GCCAATATCA ATAAGGCTTT AGACAACATC AGCCTTCTGG GAGAACGCTA TCCTGCAAGC
CTGGCAGGCC TGCAAGGGAA GTAA
 
Protein sequence
MKTRQLGISG LEVSELGFGC MGLSHGYGPA TNENDAIALI QKAYESGITF FDTAEVYGQG 
ANEQLVGKAL HGVRDKVIIA TKFGFKNGRN TDGLNSRPER IRQVAENSLR YLQTDYIDLF
YQHRVDPDVP IEDVAGTVKD LIAEGKVKHF GMSEAGLQSI RRAHAVQPLA ALQSEYSMFW
REPEHEIIPL LEELGIGFVP FSPLGKGFLT GKMNADTEFD KTDWRNVMPR FSKENRQANL
TIVDLVTKIA GEHNATPAQI ALAWLLAQKP WIVPIPGTTK MARLAENIGG ANISLGDDDI
ANINKALDNI SLLGERYPAS LAGLQGK