Gene Cpin_3785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3785 
Symbol 
ID8359955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4762587 
End bp4763390 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content39% 
IMG OID644965956 
ProductAldehyde reductase 
Protein accessionYP_003123448 
Protein GI256422795 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.105861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0153976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA TAATATTAAA TAACGGCATA AAAATGCCGC TGCTTGGTTT TGGCACTTAC 
TTGCTTCGGG ACGGTTCAAT GTGTGAACAG GCTGTACTAC ATGCTTTGAA TATTGGCTAC
AGACTGATCG ACACAGCTGC TGCATACTAT AATGAGGAAT CAGTAGGCAG CGCGATAAAA
AAAAGTAACG TCCAACGGGA AGAAATCTTC GTGACCACTA AATTTCTGCC AACTAATACC
GGGTATAAAA ATGCAAAACA CGCCGCTGAG GCATCGCTAA AGAATTTGGG ACTTGACTAT
ATTGATCTCT ACTTGATTCA TCTCCCCCAG GGAGATATAA ATTCCTCCTG GACAGCAATG
GAAGAATTAT ATAAAGAAGG TAAAGTAAGG GCTATAGGTG TCAGTAATTT CAATATAAAA
GAGGTTCAAA ATTTAATTAA GCAACATCGT GTAGTACCAG CAGTCAATCA AGTGGAGACA
CACCCGTTTT CCCAAAGAGC AGAAATGCAG CAGGCGTTGA AAGCACAAGG CATCCAGCTG
GAGTCATGGG CTCCCTTTGC TCAGGGCAAA AAAAATCTTT TTAATAATGA ACTTTTAAAA
GCGCTTTCAG ACAAATATAA TAAGAGCATT GCCCAGCTGG TGCTGCGATG GTTAATTCAA
AAAGAAGTCG TGGCTATTCC GAAATCAGCA AATGTGAAAA GGATAACTGA AAATTTCAAT
GTATTTGATT TTGAGTTATC TTCCGAAGAT ATGACAACTA TCAAATCGCT GGATAATGGT
CGTGGACTAA TCTATCATGT TTAA
 
Protein sequence
MMNIILNNGI KMPLLGFGTY LLRDGSMCEQ AVLHALNIGY RLIDTAAAYY NEESVGSAIK 
KSNVQREEIF VTTKFLPTNT GYKNAKHAAE ASLKNLGLDY IDLYLIHLPQ GDINSSWTAM
EELYKEGKVR AIGVSNFNIK EVQNLIKQHR VVPAVNQVET HPFSQRAEMQ QALKAQGIQL
ESWAPFAQGK KNLFNNELLK ALSDKYNKSI AQLVLRWLIQ KEVVAIPKSA NVKRITENFN
VFDFELSSED MTTIKSLDNG RGLIYHV