| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3737 |
|---|
| Symbol | |
|---|
| ID | 8359905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4697451 |
|---|
| End bp | 4698116 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644965906 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003123400 |
|---|
| Protein GI | 256422747 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.410029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0294352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA ACACGCTACT CGTCATCTTA TTCGCTGCAG GTATTAGCCT GTCAGCCTGT
AAGCATCCCG AGCTGGAAGA AGGAGTGACC AACAAGACGT TTGTATTGAG CGATACCATG
CTCAAAACAA TCAGAATTGA TACCGCCAGT CTTAAACCTG TCGAAAAGGA ATTACAGTTA
CCGGGCAAAG TCGTACTGAA CAATAGCAAT ATGCGGAAAA CGGATGTACT GATAGATGTG
GCCCAGGCAG ATCTGAGAAA TGTGAAAGAA GGTTATGAAG CAGAGATCAT CTCCGAAAAC
CTGCCAGAGA AAGTCTTCTA TGGAAAAGTG GAAACTGTAT ATCTCCCGAA AGATGCGGCT
GCCGGACGCC TGAACATTGT ACTGAACGAT CCGGAAGCCA TACTCAAACC GGATATGAAA
GCAGCTGTGA TCGTGCATTG TGATGAAGGA GATGATATGA TTGCCATTCC CGAGACAGCA
GTCATTGCCG ACCACAGTAA GAATTTTGTA CTGGTTTTCA AAGACAAATA CAATATCCAG
GTCAGAGAGG TGGAAACGTA TACGACAGCA GGAGATATTA TATATATACT CCGTGGCCTG
GAAGCTGGTG AAAACGTGAT ATCCGCCCAT CAACGGCAGA TTTTCGACGC ACTAAGCGAT
AATTAA
|
|---|
| Protein sequence | MKRNTLLVIL FAAGISLSAC KHPELEEGVT NKTFVLSDTM LKTIRIDTAS LKPVEKELQL
PGKVVLNNSN MRKTDVLIDV AQADLRNVKE GYEAEIISEN LPEKVFYGKV ETVYLPKDAA
AGRLNIVLND PEAILKPDMK AAVIVHCDEG DDMIAIPETA VIADHSKNFV LVFKDKYNIQ
VREVETYTTA GDIIYILRGL EAGENVISAH QRQIFDALSD N
|
|---|
| |