Gene Cpin_3696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3696 
Symbol 
ID8359864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4634982 
End bp4635767 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID644965865 
Productpeptidase-like protein 
Protein accessionYP_003123359 
Protein GI256422706 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.826453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.469025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC GAGTATTAAT CCTGGCCCTG TTGATTGTCC TGACAATGGC AGGCGCCCCT 
GGTCCCCTGG GCGATTTCAG GGAGATCACC GTCCCGACCG ATGAATGGCA CAAAGTGCCG
GCTTTACTGC ACGTTCCGCA GGGAAGTGCA AAGGAAAAGT ATCCACTGAT TATCTGCTTT
CATGGCAGAA GTATTGCAGG TCACGACATT TCCAAACTCT TCCGGGAAGG TATTCCCCGT
CAGATCAAGG AAGGCCGTAA AATTCAGGCG GTTAATAAAA CAGACGGTAA GCTGTACAAA
TTTGTCGTAC TGGCACCGCT GGCTGAAAGC TGGGGTATCA ATCCGCCACA GCTGGAATTT
ATTCTGAATG ATGTACTGAA GAAGTATCCC ATCGATTCTT CGCGCATTTA CCTGACAGGT
TACAGCGCAG GCGGATGGTG TACGCTGATG TCCATGACAG ATACCAAACA CCTGACATCC
CGTATCGCAG CCACTGTACC TATGTCTCCG GCCCCGATGT ATCCGGAAAA TTACGGTAAG
TTCAAACTGG TCACTGATGC AGGTCTACAC GCATGGTACT TTGCAGGCAC TGCGGAGCCT
CAATTTCTCG AAAATAGCCT CCGCTGCATA GATAGTACCA ACCACTATCA GAAAGGGCTG
GTAAAGCTTA CAAAACACGA TAAAGGACAT ACAGGCTGGC ATGAGTTTTA TGACCCTGCT
TACAGGGACA GTATTGACAA CATGAGCATC TATGAATGGA TGCTGCAATT CAAGCGTAAA
AAATGA
 
Protein sequence
MMKRVLILAL LIVLTMAGAP GPLGDFREIT VPTDEWHKVP ALLHVPQGSA KEKYPLIICF 
HGRSIAGHDI SKLFREGIPR QIKEGRKIQA VNKTDGKLYK FVVLAPLAES WGINPPQLEF
ILNDVLKKYP IDSSRIYLTG YSAGGWCTLM SMTDTKHLTS RIAATVPMSP APMYPENYGK
FKLVTDAGLH AWYFAGTAEP QFLENSLRCI DSTNHYQKGL VKLTKHDKGH TGWHEFYDPA
YRDSIDNMSI YEWMLQFKRK K