Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3696 |
Symbol | |
ID | 8359864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4634982 |
End bp | 4635767 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965865 |
Product | peptidase-like protein |
Protein accession | YP_003123359 |
Protein GI | 256422706 |
COG category | [R] General function prediction only |
COG ID | [COG4099] Predicted peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.826453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.469025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAC GAGTATTAAT CCTGGCCCTG TTGATTGTCC TGACAATGGC AGGCGCCCCT GGTCCCCTGG GCGATTTCAG GGAGATCACC GTCCCGACCG ATGAATGGCA CAAAGTGCCG GCTTTACTGC ACGTTCCGCA GGGAAGTGCA AAGGAAAAGT ATCCACTGAT TATCTGCTTT CATGGCAGAA GTATTGCAGG TCACGACATT TCCAAACTCT TCCGGGAAGG TATTCCCCGT CAGATCAAGG AAGGCCGTAA AATTCAGGCG GTTAATAAAA CAGACGGTAA GCTGTACAAA TTTGTCGTAC TGGCACCGCT GGCTGAAAGC TGGGGTATCA ATCCGCCACA GCTGGAATTT ATTCTGAATG ATGTACTGAA GAAGTATCCC ATCGATTCTT CGCGCATTTA CCTGACAGGT TACAGCGCAG GCGGATGGTG TACGCTGATG TCCATGACAG ATACCAAACA CCTGACATCC CGTATCGCAG CCACTGTACC TATGTCTCCG GCCCCGATGT ATCCGGAAAA TTACGGTAAG TTCAAACTGG TCACTGATGC AGGTCTACAC GCATGGTACT TTGCAGGCAC TGCGGAGCCT CAATTTCTCG AAAATAGCCT CCGCTGCATA GATAGTACCA ACCACTATCA GAAAGGGCTG GTAAAGCTTA CAAAACACGA TAAAGGACAT ACAGGCTGGC ATGAGTTTTA TGACCCTGCT TACAGGGACA GTATTGACAA CATGAGCATC TATGAATGGA TGCTGCAATT CAAGCGTAAA AAATGA
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Protein sequence | MMKRVLILAL LIVLTMAGAP GPLGDFREIT VPTDEWHKVP ALLHVPQGSA KEKYPLIICF HGRSIAGHDI SKLFREGIPR QIKEGRKIQA VNKTDGKLYK FVVLAPLAES WGINPPQLEF ILNDVLKKYP IDSSRIYLTG YSAGGWCTLM SMTDTKHLTS RIAATVPMSP APMYPENYGK FKLVTDAGLH AWYFAGTAEP QFLENSLRCI DSTNHYQKGL VKLTKHDKGH TGWHEFYDPA YRDSIDNMSI YEWMLQFKRK K
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