Gene Cpin_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3670 
Symbol 
ID8359837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4605776 
End bp4606843 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content50% 
IMG OID644965839 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_003123333 
Protein GI256422680 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.127751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.182275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAC ACCTGAAAGT CTTATTATAC CCCTTTTCAC TGCTGTATGG TCTGGTAATG 
TGGGTACGTA ACCGCCTGTA CGACAGTAAC ATGCTGACGG CGGTGGAGTT TGACCTGCCT
GTGATAGCAG TGGGCAACCT GTCCGTAGGG GGGACCGGTA AGACGCCTCA TGTGGAGTAC
CTCATTAAGC TCCTGAAAGA TAATCACCAG GTAGCCACCC TCAGCCGGGG ATACAACCGG
CGTACCAGCG GTTACCTGTT GGCCGATACA ACCAGTACCG CCGCCCAGCT GGGAGACGAA
CCGATGCAGT TCCATCAGAA ATTTCCCGAA ATAGCTGTCT GCGTAGGGGA AGAACGCATG
CTGGCCATAC CTCAGCTGCT GGGTGAACGG CCCGAAACGC AGGTTATATT GCTGGACGAT
GCTTTCCAGC ACCGTTCTGT AAAACCGGGT CAGAACATCC TGATCACCGA ATACGGACGC
CGTTTCACCA AAGACCACGT AGTACCTTTC GGTCGCCTGC GCGAAGGCCG TAAGGGCTAT
GAAAGGGCTA ATTGTATCAT TGTGTCCAAG TGCCCGCCGC AACTGTCTGA TACCGAGAAA
GCCGCCATCC GGCAGGAGAT TGCTCCTCTG CCGCATCAGC AACTGTTTTT TACTTCTCTG
ACCTATGGCG ACTTATACGA TATGTTCAGC GGCACACCGG TAGCAGCACC TGCCGATACC
ACCGTACTGC TTGTGTGCGG TATCGCAAGA CCAGAGCCGC TTTTACAGCG ATTAAAGGAA
AGCTATAAAA GTGTGTTTCT ACTCTCTTTC CCGGATCACT ATTACTATTC CGTCCCTGAT
CTGGAGAAAA TACACCGGGA ACTGGAGAAT CTGCCCGGGA GTAATAAACT GGTGGTAACA
ACTGAAAAAG ACGCCGTCAG ACTACAACTG CTGTCAGAAC AGCTGCGTCC TTTGAATTTA
CCCATCGCCG TTATGCCGGT GGAAATATCT TTCCTCTTCG GGGAAGGAGA TTCATTTAAT
AATTATATTT TTACTTACGT GGATCAGTTT GGAAGTAACC ATGATTAA
 
Protein sequence
MLKHLKVLLY PFSLLYGLVM WVRNRLYDSN MLTAVEFDLP VIAVGNLSVG GTGKTPHVEY 
LIKLLKDNHQ VATLSRGYNR RTSGYLLADT TSTAAQLGDE PMQFHQKFPE IAVCVGEERM
LAIPQLLGER PETQVILLDD AFQHRSVKPG QNILITEYGR RFTKDHVVPF GRLREGRKGY
ERANCIIVSK CPPQLSDTEK AAIRQEIAPL PHQQLFFTSL TYGDLYDMFS GTPVAAPADT
TVLLVCGIAR PEPLLQRLKE SYKSVFLLSF PDHYYYSVPD LEKIHRELEN LPGSNKLVVT
TEKDAVRLQL LSEQLRPLNL PIAVMPVEIS FLFGEGDSFN NYIFTYVDQF GSNHD