| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3653 |
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| Symbol | |
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| ID | 8359820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4587644 |
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| End bp | 4588342 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965822 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003123316 |
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| Protein GI | 256422663 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.013969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.207873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGAAGT TATTGCCGAT AATCATATCA GTTGCCAGCA TTACCACTGT TGCGGCACAA
ATAAAGAAAA AGCCAGTTAA ACACGCACCA GCGAAGAAAC ATACAACTGC TTACCATAAG
AAAGCGACGA CCCATAAGTC CAAAGCGGTT GTCCATCATA AGGTCGTGAC ACCACCACCG
ATGCCTGACA GTTTGTATTT CCCAAACTCA GATATCACCG TCAATACATA CGATACCTCA
GGCTTGCGTA ACAACATCAA GCAACTGTTC GCCGTACTGG AGTCAGAACT GGGTAAACCA
TACATCCGTG GCGCTATCGG TCCTATGGCC TTTGATTGCA GCGGTCTGAT CAAGTTTGGT
TTCTCCTTTA TCGGTATGAC CCTGCCACGT ACAGCAGCTG AAATGAGCAA CCTGGGTAAC
CTCATCACCG TATCGGACTT CACCCCCGGC GATCTGCTGT TCTTCACCGG ACGTAGTACC
AAATCCAAAG TAAAAAGAGT CGCACACGTA GGTTGTGTGT ACAAAGTAGA CAATGGGAAG
GTGCTGATGA TCCATTCCAG CAACCAGGGC GTGAACATTG TAGATATCAC GAACAGTGAG
TACTATAAGA AGCGTTTTAT CGCTGCGAAA AGGGTTATTG AAGTAGATTC TACCAATACA
GTAATACCGA TGAAGGAAGG GAATCTTACA GATTATTAA
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| Protein sequence | MKKLLPIIIS VASITTVAAQ IKKKPVKHAP AKKHTTAYHK KATTHKSKAV VHHKVVTPPP
MPDSLYFPNS DITVNTYDTS GLRNNIKQLF AVLESELGKP YIRGAIGPMA FDCSGLIKFG
FSFIGMTLPR TAAEMSNLGN LITVSDFTPG DLLFFTGRST KSKVKRVAHV GCVYKVDNGK
VLMIHSSNQG VNIVDITNSE YYKKRFIAAK RVIEVDSTNT VIPMKEGNLT DY
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