Gene Cpin_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3639 
Symbol 
ID8359806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4567360 
End bp4567956 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content48% 
IMG OID644965808 
ProductCheB methylesterase 
Protein accessionYP_003123302 
Protein GI256422649 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.619946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.473173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA CCAGGCAACA ACCACTTTTC TGCATCGGAA TAGGATGTTC TGCGGGAGGA 
TTGGAATCAG TATGTGACTT TTTTCAACAG GTCGTGGAAA AAACCGGGGC CGCTTATGTC
ATCGTACCGC ATCTGACCAG GGAATATCCC AGCCGGTTCA GTAAAATCTT ACGCAGATTT
ACCGATATGC CGGTGCATAG GGTGGAGAAT GATACCAGGC TTGAGCCTGA CCATGTGTAT
GTATTAACGG AGGACAAGAT GATGATCACG GAGGATGGCT ATCTCAAGGT CAGGAGACGT
TATCACCGGG AAGTGATCAA TAAATCCATC GATATATTTT TTAAATCCAT GGCCAGGTCA
TTTCAGGAAA ATGCGATAGG CGTGATCCTG TCAGGCATGG GGACTGATGG GATAGAAGGA
ATTAAAACGA TAGAAGATTA TCACGGACTG GTCGTAGTAC AGGATCCGGA CACGACGGAA
TTCAATGTCC TGCCGCAGAC GGCGATCAAT AAGGATGATC CGCATGCGAT ATTGCCCCCG
GCAGATATCG CCCGTTTTCT GCTCAGGCAC CTGGGCGCAT ATAACAGTTT GACCTGA
 
Protein sequence
MEITRQQPLF CIGIGCSAGG LESVCDFFQQ VVEKTGAAYV IVPHLTREYP SRFSKILRRF 
TDMPVHRVEN DTRLEPDHVY VLTEDKMMIT EDGYLKVRRR YHREVINKSI DIFFKSMARS
FQENAIGVIL SGMGTDGIEG IKTIEDYHGL VVVQDPDTTE FNVLPQTAIN KDDPHAILPP
ADIARFLLRH LGAYNSLT