Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3586 |
Symbol | |
ID | 8359753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4465691 |
End bp | 4467889 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965756 |
Product | Radical SAM domain protein |
Protein accession | YP_003123250 |
Protein GI | 256422597 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00751133 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGGTGCAT CTGTTTTCCT GATTACACCG CCTTTCACGC AGCTGAACAC GCCTTATCCG GCTACAGCTT ATCTGAAAGG CTTTTTAAAT ACGAAGGGTA TTACTTCTTT TCAGTCCGAC TTCGGCATAG AGGTAACCCT GGCACTGTTC TGTAAACAGG GGCTGCAGGA GCTGTTTGCC CAGATCAATG GTCAGTCCGT TGAACGAGCT GAAAATATCA CCCGCATAAT TGCTTTGCAG GAAGATTACA TCGAAACAAT TGACGACGTC ATCCTTTTCC TGCAGGGAAA GAATCCAACA CTTGCACATC GTATCTGCAA ACGTGACTTC CTGCCGGAAG CCGGTCGTTT TGCACAGCTG GAGGACCTGG ACTGGGCTTT TGGCTCCATG GGAACTCAAG ATAAAGCTAA ACACCTGGCT ACTATGTACC TGGAGGATCT GTCCGATCTG ATCATGGAAT GTGTGGACGA GCACTTTGGT TTCAGCCGTT ATGCGGAGAA ACTGGCCCGT TCTGCCAATA GTTTTGATGA ACTGTATACT GCCCTACAGC AGGAGTATAC CTTTATCGAT CGTATGCTGA TCAACCTGCT TTCCCGGCAT ATGGCGCATG TCCAGCCTAA ACTGGTGGCC ATCTCTGTAC CGTTCCCGGG AAATTTGTAT ACTTCGCTTC GCTGCGGACA ATGGATCAAA GCCAATTATC CGGACGTAAA GATTGCCATG GGCGGCGGCT TTGCCAATAC AGAGCTGCGC TCGCTTTCAG ATCCAAGGGT ATTTGAGTTT TACGACTTTA TTGCATTGGA TGACGGGGAA GCGCCATTGG AGAATCTCGT TGCCCATATC GAAGGCAAAA AAGAGCTGAC TGAACTGAAA CGTACTTTCA CCATGGTCGA GGATCAGGTG ACTTATGTGA ATGATAAAAG CTGCTCTGAC TATAAACAAT CGCAGGTCGG TACGCCTGAC TACAGCGATT TCCTGCTTGA TAGTTATATC TCTGCTATAG AAGTGGTCAA TCCCATGCAT CGCATGTGGA GTGATGGCCG TTGGAATAAA CTGACCATGG CGCATGGCTG CTATTGGGGT AAATGTACTT TCTGTGATAT CTCACTGGAT TACATTCGTT TATATGAGCC GATCGCAGCA CAGCTGTTGT GCGACAGGAT GGAAGAGATC ATTGCACAGA CCGGACAGAA TGGTTTTCAC TTCGTGGATG AAGCTGCTCC GCCGGCATTG ATGCGTGCAT TGGCATTAGA GATCCTGAAG CGTAAACTGA ATGTGAGCTG GTGGACAAAT GTGCGTTTTG AAAAGAGCTT TACGAGGGAT CTTTGTCTGC TGTTGAAAGC CTCGGGTTGT ATCGCTGTTT CCGGAGGATT GGAAGTCGCT TCCGACAGAC TGCTGGAATT AATTCAGAAA GGGATTACAG TAGCACAGGT GGCACAGGTC AACCGCAACT TTACGGATGC CGGTATCATG GTACATGCTT ACCTGATGTA TGGTTTTCCG ACACAGACCG CCCAGGAAAC CGTCGACTCA CTGGAAATGG TGCGTCAGAT GTTTAAAATA GGTGTGCTGC AATCTGCTTT CTGGCATCAG TTCACCATGA CAGCGCATAG TCCGGTTGGA CAGGATCCGC AGAAATTCAG CGTAAAGAAA GAAACAGAAG TGATCGGTGC TTTCGCCAAT AATGATATCG TACATATTGA CGAGACGGGG GCGGAGCACG AACTTTTTGC CTACGGACTA AAGAAATCGC TGCTGAACTT TATGCATGGT CTCTGCCTGG ATGATCCTTT GCAGAAATGG TTTGAATTCA AGGTTCCTAA GACAAAAATT GCCCCTGATT ATATAGAAAA GGCATTACTG GAGGACCAGT ATGCACCTTC CAAACCGACG AGTAAGATCG TCTGGCTGGG AAAAACACCA GATGTACAGA CCCTCACCAA AACAAAAAAA GGAAGTTCCT GGGAAGTGAC CTCGCTTACT TTCCAGAATC GTAAGGAAAA AGCCAGTATC AGCGTTAATA AGGAAGAGGG GATCTGGTTG GCCGATATGC TGGAAAAGCT GTCTGTCCGC CAGCAGAAAA CATATACGCT CAAGGAGGTG ATGGAGAGCT ATGATGCTGC CGGATTGGAG GATTTTGAGC TTTTCTGGGA CAATAAACCC GTAAATTCGC TGTATAAATA CGGACTTTTG AAATTGTGA
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Protein sequence | MGASVFLITP PFTQLNTPYP ATAYLKGFLN TKGITSFQSD FGIEVTLALF CKQGLQELFA QINGQSVERA ENITRIIALQ EDYIETIDDV ILFLQGKNPT LAHRICKRDF LPEAGRFAQL EDLDWAFGSM GTQDKAKHLA TMYLEDLSDL IMECVDEHFG FSRYAEKLAR SANSFDELYT ALQQEYTFID RMLINLLSRH MAHVQPKLVA ISVPFPGNLY TSLRCGQWIK ANYPDVKIAM GGGFANTELR SLSDPRVFEF YDFIALDDGE APLENLVAHI EGKKELTELK RTFTMVEDQV TYVNDKSCSD YKQSQVGTPD YSDFLLDSYI SAIEVVNPMH RMWSDGRWNK LTMAHGCYWG KCTFCDISLD YIRLYEPIAA QLLCDRMEEI IAQTGQNGFH FVDEAAPPAL MRALALEILK RKLNVSWWTN VRFEKSFTRD LCLLLKASGC IAVSGGLEVA SDRLLELIQK GITVAQVAQV NRNFTDAGIM VHAYLMYGFP TQTAQETVDS LEMVRQMFKI GVLQSAFWHQ FTMTAHSPVG QDPQKFSVKK ETEVIGAFAN NDIVHIDETG AEHELFAYGL KKSLLNFMHG LCLDDPLQKW FEFKVPKTKI APDYIEKALL EDQYAPSKPT SKIVWLGKTP DVQTLTKTKK GSSWEVTSLT FQNRKEKASI SVNKEEGIWL ADMLEKLSVR QQKTYTLKEV MESYDAAGLE DFELFWDNKP VNSLYKYGLL KL
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