Gene Cpin_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3572 
Symbol 
ID8359739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4451484 
End bp4452590 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID644965742 
Producthypothetical protein 
Protein accessionYP_003123236 
Protein GI256422583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0459305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0600859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA TTTTATCAGC TACTTTCCTG TCAGTGATCT GTACGGGGAT GATTTCGCGC 
GCCCAGGCAC AGGGGTGTGT CGCTTTACGC GGTAACGGAC CGGCCACCTG CACCCTCACT
CATCCGGATG AAGATCGTTC AGATAAATGG ATCTTCAGTA TGGGCGCCCG GTATTTTAAA
TCTTACAAAC ATTTTAAAGG TTCAGAAGAA CAGAAAGAGA GAGTGCTGAA CGGTACAGAA
GTGATCAACC ATCAAACAGC CATCGATCTG ACGCTGACAC GTCTTATTAA CAGCCGTTGG
AGCGTGATGC TGGACGTCCC TTTGCTGGCA AATGCCAGGT CTTCCTTATA TGAGCATGGC
CTGGTAAACG GAGTCAATAA TTACAACCAG CGGCATAGTA TGCATTCCTA TGGATTGGGA
GATATGCGTA TTGCGGTCTA CCGCTGGCTG CTGGACCCTG AAAAGCATAA GAAAGGGAAT
ATTCAGGCAG GGTTGGGGAT TAAATTCGCT ACCGGTGATT ATGATTACCA GGACTACTGG
TATAATGTGG GGCCGAATGG CACCAGACAG CTGCGTACTG TGGACCAGTC CATTCAGCTG
GGAGATGGCG GTACCGGACT TACCGCAGAA CTCAACCTCT ACCAATACTT TTCCCGGCAT
TTCGGGGTAT ACGGTAATTT CTATTACCTG AGTAACCCGA GGGAACAGAA TGGGGTACGT
ACCTATCGGG AGACATTGAC CCCGGCACTG GGCAATGAGG CCATTTGCAG CGTGCCTGAT
CAGTATATGG CGCGGGCAGG TGTCAATTAT ATGACAAAGG GTTTTAGCGC AGCATTGGGC
GCCAGACTGG AAGGTATTCC GGTAAATGAT CTGATTGGTG GCAGTGGCGA TTTCCGTCGT
CCGGGGTATG TGATCTCCCT GGAGCCCAAC GTTTCCTATG CTTTTAAAAA GATGAACGTC
TTTGCGGGTG TTCCTGTCGC TTTACGCAGG GACAGGACGC AGAGTAATAC CGATAAAGCC
AGAAGTACGC CTGCCAATAA GGTGAACGGC GATGCCGCCT TTGCTGACTA TGTGATAAAT
GTCGGGTTTT CAGTACGTTT CAGATAA
 
Protein sequence
MNRILSATFL SVICTGMISR AQAQGCVALR GNGPATCTLT HPDEDRSDKW IFSMGARYFK 
SYKHFKGSEE QKERVLNGTE VINHQTAIDL TLTRLINSRW SVMLDVPLLA NARSSLYEHG
LVNGVNNYNQ RHSMHSYGLG DMRIAVYRWL LDPEKHKKGN IQAGLGIKFA TGDYDYQDYW
YNVGPNGTRQ LRTVDQSIQL GDGGTGLTAE LNLYQYFSRH FGVYGNFYYL SNPREQNGVR
TYRETLTPAL GNEAICSVPD QYMARAGVNY MTKGFSAALG ARLEGIPVND LIGGSGDFRR
PGYVISLEPN VSYAFKKMNV FAGVPVALRR DRTQSNTDKA RSTPANKVNG DAAFADYVIN
VGFSVRFR