Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3556 |
Symbol | |
ID | 8359723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4432629 |
End bp | 4433738 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644965727 |
Product | hypothetical protein |
Protein accession | YP_003123221 |
Protein GI | 256422568 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0917866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0496884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATATT TAAGTCCGGT GGAAGTAAAT GATCTCAGCC TGGCGATCGC GGCTGCTACA GATCCTATTG CGAACAGAGG AGCCTTATAT CAGTCGGTGG ATCCCAGGGT CATGATGGTG ATGCCCATCG GTGGCGGGGC CATACTCCCG AAACTGATGA CGGAGATCTC CTTTATGAAC AACCTGGAAC GCATCACTAC CGGACAGGTA CCCTTGCAGA TATTCCTGCA GAATGCAGCC CTGCTGGTGA GCGTATTACC GGCTAGTGAG AAAACCGTCC GCCTGCTGCT CGAAAAGGTC ATTCAATTAT CCTCAGGAGC GCCACCAGTG AATATCGCAA TGGCGCCGAT CATTAATCAG ACCTTTATTC ACCGGGATGA TATGGTCACC TTCTCGTTTG TGGAAGCAGC ACTTAAAACC GCCAATTCGG TCTTCAAACT ACGGATCCCT GCTTTTGAAA ACGGACAGCC CCGGCTGGAC CAGAGCGGTA ATCCCCTGCA ATTCCTGGGT ACCGGCTGGC TCTTGACTGA TTCACTACTG ATCACCAATC ACCATGTCAT TAATGCCCGG CAGGACGGAG AAGGCGAAGC CGCGGAAACA GATCTGCTTT TACAGGGAAG CGGTGCAGGT GTGATCAGTG ATTATAATGT GGAAGGTGCG GCTGAAAACC CGCCTGCACA GGCGATTAAA CTGGAAGCCT GGCAGAAAAG CCTGGATTAT GCGGTTATCC GTATCCCTCC CAGCGGCAGG ACACCGCTCC GCAGGAATCT CCTTACCATA CAGGTACAAC AGGACCCGAT ACCTGTCAAT ATCATACAAC ATCCGGGAGG ACGCAGCAAG CGCTATGGTA TCCGTAACAA CCTGGTCTAT GCCTCTACAC AGGACACCTT GTGTTACTTT ACCGATACCG AATCCGGCTC TTCCGGTTCA CCGGTATTCA ATGATAAATG GGAAGTAGTG GCTTTACATC GCGGGGCCAA ATACGTAACA GGGGTCCGAT TCCAGGGTAA GGATACGGCC TACGTAAATG TAGGCACGCA CCTCAGATTG ATTATCGACG ATATACAGCA ACGATACCCT GCATTAGCGA ATGAGATCCT GCAAGGCTAA
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Protein sequence | MAYLSPVEVN DLSLAIAAAT DPIANRGALY QSVDPRVMMV MPIGGGAILP KLMTEISFMN NLERITTGQV PLQIFLQNAA LLVSVLPASE KTVRLLLEKV IQLSSGAPPV NIAMAPIINQ TFIHRDDMVT FSFVEAALKT ANSVFKLRIP AFENGQPRLD QSGNPLQFLG TGWLLTDSLL ITNHHVINAR QDGEGEAAET DLLLQGSGAG VISDYNVEGA AENPPAQAIK LEAWQKSLDY AVIRIPPSGR TPLRRNLLTI QVQQDPIPVN IIQHPGGRSK RYGIRNNLVY ASTQDTLCYF TDTESGSSGS PVFNDKWEVV ALHRGAKYVT GVRFQGKDTA YVNVGTHLRL IIDDIQQRYP ALANEILQG
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