| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3541 |
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| Symbol | |
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| ID | 8359708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4412214 |
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| End bp | 4414007 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965712 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_003123206 |
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| Protein GI | 256422553 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.165749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.131888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAT CAGCGATAGA TACGACGGTT ATATTCATTT TTTCAGCCTT TGTGCTGATT
ATAGGATTGC TGTTTGCCCG TACCGGAAGA AACATGAAAT CTTTCTTTGC AGGCGGGGAG
GCCGTGCCCT GGTTTATCGG AGGCTTGTCC CTTTTTATGA GTTTCTTTTC TGCGGGTACT
TTTGTGGCCT GGGGTAGTAT TGCTTATAAG TATGGTTTTG TATCAGTCAC GATACAATGG
ACCATGTGTC TCGGCGGCAT TATTACTGCT TTTTTGTTAG CCCCCCGCTG GAAGCGTACA
GGCGCTCTGA CGGCAGCAGA ATTTATTCGT CAGCGGCTCG GCGCACCGGT ACAGAAATTT
TATGTCAACA TATTCCTGCT GGTATCCCTG TTCAATAAAG GCGCTGTATT GTATCCCGTA
GCAAAACTGG TCAGCGTATC ACTAGGCTTT CCCCTGACTA CCTGTACGAT CGTATTAGGG
TTGATGATGA TCGCCTACAC TGCTATTGGT GGTTTATGGG CGGTGATGGT GACCGATATT
CTACAGTTTG TAATTCTTAC GGCAGCCGTG CTGATGGTCT TACCCTTATC GCTTGATGCA
GCAGGTGGAT GGACTAAGTT CACACAACAG GTACCCGCTG ATTTCTTTAA TGTCATCAAC
GGAGAATACT CCATCGGTTT CATTCTCGCA TTTGCGTTAT ACCATATCAG CTACATTGGC
GGTAACTGGA CTTTCGTGCA ACGTTATACA AGCGTAGATT CTCCGAAATC AGCAAAGAAA
GTAGCGTTTT TATTTGCAGG GTTATACCTG GTTAGTCCGG TGATATGGAT GCTGCCACCT
ATGATTTACC GTAGTATCGA TCCGGCATTA ACCGGATTGA ATACGGAGAA TGCCTATCTG
CAGGTTTGCC GCTTAGTGTT ACCACCGGGT CTCATGGGAT TGATGCTGAC GGGTATGTAC
TTCTCTACAT CCGCGACTGC GAATACCACC TTAAATGTTA CTTCTGCTGT TATCACCAAT
GATATTTATA AGGCATTGAT TAATCCCGGG GCCAGCGACC GGCAGCTGAT CCGTGTGGCG
CGCCTTTCCG GTTTATTACT GGGAATAGGG ATGATTGGTG TGGCATTGCT TGTACCGGCG
GCAGGAGGTA TGATTGAAGT GGTGCTCAGT ATTGCAGCTA TTACTGGCGG TCCTTCTTTA
TTGCCGCCAC TGTGGGCATT GTTCTCAAAG AAACTGACGG GCAAAGCGGC TTATATTATT
TCGGGCGCCA GTTTGCTGGT CAACCTGTTG TTTAAACTGC TTGTACCGGC ATTGACTACA
CTGAAGCTGA GCCGTTCCGA AGAAATGCTC TTGGGTGTAG GATTACCATT CCTGTTATTG
CTACTCTATG AATTTGTCAT CGCGCCTACA ACAGCGGCGA AAGAATACCA GGATTACCGC
ATATTCCGTA CACGACAGCA ACAGGACGCG GCAGCACAAT CCGCAGCAGA AAAAGAAGCC
ATCCATAAAC AGAACCTTTT CGGGCTGCGC GTGATTGCAT TTTCACTGGC ATTTACTGCG
CTGCTGCTCT ACGTATTGAG TATACTGGCC TCCAGCGGTA ATATGCTGGT AGCAATGATT
GCAAGCGCCG TATTACTGGC GGCTATTATT CCGCTGCGTG CCGTGCGGAA GATCCGTAAA
CAACCCGAAT ACATGCTACA AAATAACATC CCTGTAGAGG ATAGTGATGT ACACCATCAC
CTGAAAAACA GGGAATCAAA AAACGAAGCT TATGATGAAA GAACAAGGCA GTGA
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| Protein sequence | MMKSAIDTTV IFIFSAFVLI IGLLFARTGR NMKSFFAGGE AVPWFIGGLS LFMSFFSAGT
FVAWGSIAYK YGFVSVTIQW TMCLGGIITA FLLAPRWKRT GALTAAEFIR QRLGAPVQKF
YVNIFLLVSL FNKGAVLYPV AKLVSVSLGF PLTTCTIVLG LMMIAYTAIG GLWAVMVTDI
LQFVILTAAV LMVLPLSLDA AGGWTKFTQQ VPADFFNVIN GEYSIGFILA FALYHISYIG
GNWTFVQRYT SVDSPKSAKK VAFLFAGLYL VSPVIWMLPP MIYRSIDPAL TGLNTENAYL
QVCRLVLPPG LMGLMLTGMY FSTSATANTT LNVTSAVITN DIYKALINPG ASDRQLIRVA
RLSGLLLGIG MIGVALLVPA AGGMIEVVLS IAAITGGPSL LPPLWALFSK KLTGKAAYII
SGASLLVNLL FKLLVPALTT LKLSRSEEML LGVGLPFLLL LLYEFVIAPT TAAKEYQDYR
IFRTRQQQDA AAQSAAEKEA IHKQNLFGLR VIAFSLAFTA LLLYVLSILA SSGNMLVAMI
ASAVLLAAII PLRAVRKIRK QPEYMLQNNI PVEDSDVHHH LKNRESKNEA YDERTRQ
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