| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3540 |
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| Symbol | |
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| ID | 8359707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4409650 |
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| End bp | 4412217 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644965711 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123205 |
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| Protein GI | 256422552 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.179214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.178629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGA AAGGAAAATT ATACAGCCTG GGGTTGATAC TGTGTGTGCA GACCGTTACC
GCGCAGCTCC GGCTACAGAA TGAAAGACTA CAACTGGAAT GGACAAAGCA ACCGGATGGA
TACCAGCTGG CGACGATCCG TACAGATGGG CAGACCTTAT CAAATCCATC AGGCAAATAC
CTGTTGCTGT ACAGTGCCGG TAAACCAGAC AGTATACCCA ATCTGCAATT AGCCAATACA
CATCCCGGTG GTTTCTCCCT GGCCGACTAT CGCTACCTGG TGAAGAACTG GGAAGATAAT
CTTCGTCCGG TGAATATGAA TACCGCCGGT ATACCGCTTC CTTTCTATCC TGAGCGGGTA
CAGCAAACGG TCGCCGGAGC GCTGGTATTT ACCCATACGG ATGACTATGG GGAATGCAAA
GCTGTCTGGC AACTGGACAA ACAATTTCAA CACGATATAC TGGTCGATAT CACTTTTACC
GCTAAGAAGG CCGGTTATTA TGCCATCGCT ACGCCTACAC TGGCTACTGC CCAACAGGAT
AAACCTGAAT TTGGGATGAT TCCGGGGTAT TTCCAGAGTG ACCTCGTACA GCACGACCTG
GTACTCAGTT ATGGTTACGG ACAAGGCATA CCCGATAAAC CGGTCGTCTT CCGCGAACGT
ACCGCCAGTA CTTTAAGTCC GCTGATCACC ACACAAGGTA TCACCATGGC GGTCATTCCC
GCACCGGGTA CCAGTCGCGA TCCCTGGGAA AAAGACCACT ATACCCACCA GCAATGGAAA
CTGGGATTAT CTGTGATGAA CAGGGATGGC CGCTTTACAC CGGTCGCCTA TCATCCTGTA
CTTGGCGAAA CAGGTTCTTA TATGGAGCCC GGCGCACAAC GAACTTTCTC CTTCAGGTAT
ACGGTACAGG CGGCAGACTG GTACACGGTG TACCAACATG CGGTAAACGA CGTCTATCAT
TTTGCGGACT TCCTGAAACT GAAGACGACC CGGCAGTCAC TCTCCGACAG GATCATGTCA
ATCCTGCATT ACCTGGATGA CGACAGCACC TCGATGTGGA AGACCTTTGA CTACAAAGGA
TTGAGAATAG GCGCACAGTC CTATCTCGGC GGTGTGGTGG GTTCCGGTGG GGATGCCATG
AAAAACTCTG ACTATGGGGC TATGTGGATG CTGGCAACGA TTACGGGAGA TACGACTTTA
TTACACCAGC GACTGCCGGC AGCCCGTAAT TTCAAACTCG TACAGCAGCA GGCGGAACCT
GGCTTTTTCC AGGGCGCTGC CGTCGGACAA TACTACCTCT GGAAAAAACA GCGTTTTACG
GAGGAATGGG GCACTTATGT GGAACCTGTG GCACTGACCT ACTACACGAT GCTGGATATT
GGTAATATAC TCCTCTTTCA GCCCAAAGAT GATGCCTTGA GACAACGCCT CAGACTGGGC
GCTGATAAAT TGCTGGAATG GCAGCAGGAA GATGGGCACT GGGAAGTAGG ATATGATGGT
AGCAGCACCA AAGCTGTTTT TACGGATATC CCCGATCTGC GGCCGACTTT TTACGGACTG
CTTGTCGCTT ACCGTATACT GAAGGATGAA AAGTATTTGA AAGCTGCGAT GAAAGGGGCA
GACTGGCTGA TCCGGGAGGG CGTCAATAAA GGTAGTTTCC TCGGCGTATG CGGGGACGCC
CGTTTTGTAC CGGATTTTGC TACCGGTCAG ACCGTACAGA CCCTGCTCGA CCTCTATGAA
AGCTGTGGTG ATGAAAAGTA TAAATCGGCG GCAATCGCTG CTGCAAGAAT TTATACGGCC
TCCATTTACA CACATCCGGT GCCTTCTATG GAAAGAAAGA CAGTCAACGG ACAGAAATGG
GCAGACTGGC AGATCAGTCA GGCAGGACTG AGTTTTGAGC ATGGAGGCAG TCTGGGATCG
GCGAATTCAC ACGGTCCGAT TATGCTGGCC AGTCATGCCG GTATGTTTGT ACGCCTGTTC
TCCCTTACAC ATGATTCACT CTTTATCAAT ATGGCGCGGG CGGCTGTACT GGGTCGTGAC
GCTTTTATAG ACACCGCCAC CAGTGTGGCT TCCTACTACT GGCGGGCGAT GAATAAGGGT
GCTGGTCCTT ATCCGCATCA CGCCTGGTGG CAGGTCGGAC TGCTGACCGA CTATCTTGTG
TCAGAAGTGG CGCTCCGCAG TAATAACGGG ATCAGTTTCC CAAAAGGATT TGTTACACCC
AAGGTTGGCC CACATGCCTG TTACGGATTT GCGCCCGGTC AGTTGTTTGG GAGAGCAGTA
GACCTGTATA TGCCGGATGG GTGGTTGCAG GTAAACAATC CACAGGTGGA TTATCTCAGT
GCGAAGAGTC CGTCGGGAAA GGAGATATAC ATCCTGCTCT TAAACAATGA TGATGCTCCT
CAGCAAACAA CGGTCACCAT CAACGCAGGC AAAGCGTCTG CCGTGAAAAC ACAGCAGGTG
AAATTACTCA ATGCTACAGG AACTGTTGAA GATGAAAAAT TATCCGGTCA GCAATGGTCG
GTTAACATTC CGCCATATGG CCTGAAAATA ATTGCACTCA GCTTATGA
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| Protein sequence | MRLKGKLYSL GLILCVQTVT AQLRLQNERL QLEWTKQPDG YQLATIRTDG QTLSNPSGKY
LLLYSAGKPD SIPNLQLANT HPGGFSLADY RYLVKNWEDN LRPVNMNTAG IPLPFYPERV
QQTVAGALVF THTDDYGECK AVWQLDKQFQ HDILVDITFT AKKAGYYAIA TPTLATAQQD
KPEFGMIPGY FQSDLVQHDL VLSYGYGQGI PDKPVVFRER TASTLSPLIT TQGITMAVIP
APGTSRDPWE KDHYTHQQWK LGLSVMNRDG RFTPVAYHPV LGETGSYMEP GAQRTFSFRY
TVQAADWYTV YQHAVNDVYH FADFLKLKTT RQSLSDRIMS ILHYLDDDST SMWKTFDYKG
LRIGAQSYLG GVVGSGGDAM KNSDYGAMWM LATITGDTTL LHQRLPAARN FKLVQQQAEP
GFFQGAAVGQ YYLWKKQRFT EEWGTYVEPV ALTYYTMLDI GNILLFQPKD DALRQRLRLG
ADKLLEWQQE DGHWEVGYDG SSTKAVFTDI PDLRPTFYGL LVAYRILKDE KYLKAAMKGA
DWLIREGVNK GSFLGVCGDA RFVPDFATGQ TVQTLLDLYE SCGDEKYKSA AIAAARIYTA
SIYTHPVPSM ERKTVNGQKW ADWQISQAGL SFEHGGSLGS ANSHGPIMLA SHAGMFVRLF
SLTHDSLFIN MARAAVLGRD AFIDTATSVA SYYWRAMNKG AGPYPHHAWW QVGLLTDYLV
SEVALRSNNG ISFPKGFVTP KVGPHACYGF APGQLFGRAV DLYMPDGWLQ VNNPQVDYLS
AKSPSGKEIY ILLLNNDDAP QQTTVTINAG KASAVKTQQV KLLNATGTVE DEKLSGQQWS
VNIPPYGLKI IALSL
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