Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3458 |
Symbol | |
ID | 8359624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4314370 |
End bp | 4314732 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965631 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003123126 |
Protein GI | 256422473 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0218436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATA ACGAATTTAA ATATTGCGGT CTGAATGTGG CACTGGGTGT CTTGTCTGGT AAGTGGAAAC CGGTGATTCT CTTTTACCTC TTCCATCAGG AAGAGATCAG GTTTACAGAA TTGTGGCGGG CTATTCCCAA AGTGGCGAAG AAGGTATTGC TGGAACAGCT GCGTCAGATG GAACAGGACG AATTGATCAT CAGGGATGAA AAGAATGGCT TTCCACCGGA AGTATGGTAC CGTATCTCAG AAAAGGGTAG AGCATTGGGG CCTGCGCTGG CAGCGCTGGA ATCATGGGCG AACGAACATG CGGCTGAGAA GGTAGACTTG CTGAAAATCC GGCGGAAGGT CACCCTGCGT TAG
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Protein sequence | MNYNEFKYCG LNVALGVLSG KWKPVILFYL FHQEEIRFTE LWRAIPKVAK KVLLEQLRQM EQDELIIRDE KNGFPPEVWY RISEKGRALG PALAALESWA NEHAAEKVDL LKIRRKVTLR
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