Gene Cpin_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3415 
Symbol 
ID8359581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4227115 
End bp4228158 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content46% 
IMG OID644965588 
ProductFkbH like protein 
Protein accessionYP_003123083 
Protein GI256422430 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3882] Predicted enzyme involved in methoxymalonyl-ACP biosynthesis 
TIGRFAM ID[TIGR01681] HAD-superfamily phosphatase, subfamily IIIC
[TIGR01686] FkbH-like domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.128111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AATGTATTAA ATGCGTCGTA TGGGACCTGG ACGAAACCGT ATGGCATGGC 
ATTCTTTCAG AAAATGACCA GCTAAGGTTA AGAGAAGGGA TAGCCGATAC CATCCGCCTG
CTGGATGAAA GGGGAATCAT CAATACCGTA GCGAGTAAGA ATAACGCGGA AGATGCACTG
CGCCAGCTGG AATCATTCGG ATTACTTGAA TATTTTTTGC TTCCCCAGGT CAACTGGGGC
GTGAAATCCG CTTCTATCAG AGCGATTAAA GAAACCCTCA ATATAGGTTA TGACGCTATT
GCGTTTATAG ATGATCAGCC GTTCGAGAGA GATGAAGTAA AATCTGTACT CGATGAAGTC
AACTGTTTTG ATGTGGATGT GATAGGAGGC ATCTCTGCTG ATGATCGCTT TATTCCACGT
TTTATCACGG AAGAATCCGC AAAACGCCGG ATGATGTACG TGACAGATGA ACTACGTAAA
CAGGAGGAAG AACAGTTTAC CGACAACCAT TCATTCCTCA GTCAGCTGGA TCTGCAATTC
AATATAGCCC TTGCAGAAGA AAAAGACCTT CAGCGTGTGG AAGAGTTAAC CGTCCGCACT
AACCAACTGA ATGCAACCGG TTACTCTTAT ACCTATGAAG AACTGCAGCA GCTGCTGGAA
AACGATGGTT ATCGTGTACT GGTGTGCGAA CTGACCGACA AATATGGAAC CTACGGAAAG
ATAGGTGTAT CCATGTTACA GACAGCAGGG GATGCCTGGA ACATTCACCT CCTGCTAATG
TCCTGCCGCG TAATGTCCAG GGGAGTTGGC TCCGTATTAC TGGCATACAT TATACAGCAG
GCCGTTAAAT ACGGAAAGAC GCTTTATGCT GATTTCCTGC CTACATCACG TAACCGGCAG
ATGTATATCA CCTACAAATT TGCCGGCTTT AAAGAGCTGG GTAAACTCGA AAATGGTGGT
GTACAGCTGG TGCACGACGG TGTGACCGTT CCCGTGATCC CCGATTATCT TCAATTAACT
GCAACAGACC TCTCTGCCCG GTAG
 
Protein sequence
MEKKCIKCVV WDLDETVWHG ILSENDQLRL REGIADTIRL LDERGIINTV ASKNNAEDAL 
RQLESFGLLE YFLLPQVNWG VKSASIRAIK ETLNIGYDAI AFIDDQPFER DEVKSVLDEV
NCFDVDVIGG ISADDRFIPR FITEESAKRR MMYVTDELRK QEEEQFTDNH SFLSQLDLQF
NIALAEEKDL QRVEELTVRT NQLNATGYSY TYEELQQLLE NDGYRVLVCE LTDKYGTYGK
IGVSMLQTAG DAWNIHLLLM SCRVMSRGVG SVLLAYIIQQ AVKYGKTLYA DFLPTSRNRQ
MYITYKFAGF KELGKLENGG VQLVHDGVTV PVIPDYLQLT ATDLSAR