| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3406 |
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| Symbol | |
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| ID | 8359572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4201217 |
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| End bp | 4204531 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965579 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003123074 |
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| Protein GI | 256422421 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.42881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATC CTTTATTACA TGAGCTGTTT GATAATATCA GCAGCAAATA TCCATCCAGG
ACTGCTGTTG CAAACGGACA GCAGGAAGTG TCCTACGAAG CGCTACAGCA GCGTAGCCTG
CAGCTGGCAG CCTCTTTACA GGACGCCGGG CTGGAAAAGG AAACAGTAGT AGCTACCTTG
TTGCCCGCCG GGGCTGACCT GGCAGCAACC ACCATCGCAC TGTTCAGAAC AGGACTTATT
TATATGCCGC TGGACCCACG TATTCCTATA ATACGTGTAC AGAATATGCT CTCCATCACC
GGAAGCAAAG TCATTGTTAC CAATAAAGAA TTACTGGATA CCGCCAGGAA TATTGTCAAA
GGTGGGCCTG ACAGTCTTCA GTATGTATTG GTGCTGGACG ATGTGGCGAC ACAGCTCTTT
TCAGTTGATA AAGCGGGTAC GCTTGCTCCC GCTGCATTTC CTGGCAATGT CGCTCAGAAT
GATACCGAAA CAGATAGCTG TTACATCTTT TTCACTTCCG GTACCACCGG CAGCGGAAAG
CCTATTCTTG GCAGTCACCA GGGATTGAGC CAGTACATAC ATTGGGAGAT AAAAGAATTC
GGCCTGAATG AGAACTGCCG CGTTAGCCAG CTTGCACAGG TGACCTTTGA TGCTTCCCTG
CGCGATCTGT TCGTACCGCT TTGTACCGGA GGTACCTTGT GTGTGCTCCC TGCAGATGCA
AAATTTCAGA TGCCTGTATT GATTGAATGG CTGAAGGCAC AGAAAGTGTC ATTGATCCAC
TGTGTGCCTT CTATATTCCG TCTGCTCACC AGGGAATTGG AACAGCAGCC GGTAGGAAGC
GTCGCTTTCC CCGATCTGAA ATTTATTCTC ATGGCGGGAG AAATGTTATA TGCAAAAGAT
ATAGCCGCCT GGAGACGTGT TGCAGGTACC ACGACAGAAC TTGTTAATCT CTACGGCGCT
TCTGAAACAA CCCTGGTAAA AACCTTTCAC CGTATATCAG AGATACCTGA AGATGGTGGA
GAGGCGCTGC ATGTCGGACA ACCAATCGAC CAGGCATTTA TTGCTGTCAT GAATGGTAAC
CGCCTGGCCA GAATCGGCGA AATCGGAGAA ATATATATCA TCACTCATTA TACCTCAAAA
GGTTATTTCG CCGATCCTGT AAAGACCGCT GAACGTTTCG TAAAGAATCC ACTGGAAGGC
AGCTCCGTAC CACTGGCATA TCGTACTGGT GACATGGGCC GCTATCGTAA GGACCGTAGT
ATTGAAGTAC TGGGCCGTCA GGATGACCAG TTGAAGATCA ACGGCATCAG GGTGGAACTG
CAGGAACTGG AGCAGATTAT CCTGGAAACT GCGGGTATCG CACAGGTAGT GATTAAAGCA
ATCGAAAGTC CGACAGGCGC TATGGAACTC GCTTGTTATT ATACAGGTGT TGCGCAGGAT
GCAACGAAGC TGCGTAGCGT ATTAAAAGAA AAACTGTCCG ACAGTGTATT GCCCGCTTAT
TTCATACACC TGAAGGAATT CCCGCTTACA CTGAACGGTA AAGTAGACAA AGCGGCACTG
ATTAAGCCGG AGTATAAAGA CAACACAGAT GCCGCAGGTG GATCTGCAGT AGTTGCCAGC
GCCAGTGAGA CGATTATGGA GGATATATGG CGTGACGTGT TCAAAATGAA ACAGATCGGA
CGTAATGCGT CTTTCTTTTC TATCGGTGGC ACTTCATTGA AAGCGATCAG GGTCATTTCA
CAGGTTTACA AACGTTTTGA AGTGATGATC ACGATCAATG ACCTGTTTGC AAATCCAACC
ATCGCAACGC TGACAGGTTT TGTAGAAAAA GGCAGTAAGA AAGCATTCAC TGCTATCAGA
CCGGTTGCTA AACAGGATAC ATATGAAGTA TCTGCTGTAC AGAAAAGAAT ATGGGCCATT
GACCAGTTTT CGGATAATGG TGCGCTCTAC AACGTACCGG AATTTTACCT TTTCGAAGGC
CCGTTGGATA CAGCGGCATT CGAAAAAGCA CTGGCAGCAC TGGTAGGACG TCATGAGATA
CTGCGTACCA CTTTTGAGCT TATAAATGGA GAACCAAGAC AACGTATTCA TGACGCCGCC
TCCTGGAACG TTTCCTTGAA GTTGTATGAC TATAGCAATG AAGCGTCTCC ACTTGACAAA
GCAATCGCTT TTTCAACGGA AGCAGCGCTT GAACCATTTG ATCTGCAGAA TGGCCCCCTG
CTTAGAACAA CATTGCTGAA AACAGGTAAG GATGAACACC TGTTCGTCTT TGTTACCCAT
CATATTGTTT CCGATGCATG GTCACAGGAA ATCATTGCAC GTGACGTGCT GGCTTTCTAT
GATGCCTTCA ATGAAGGAAA ACAAACGGCA CTTGAACCGC TGAAGATCCA GTATAAAGAC
TTTGCCGCCT GGCATAACGA AAGACTGACT TCCCGTTCGG CAGATCATCG CGCTTTCTGG
AAAGCACAGT TTGCAGAGGC GGCCCCTAAA CTCAAACTGC CACTGGACTA TCCACGCCCT
GCACAGCAGA CGTTTAATGC AGAAGAAGTG TCTTTCAGAC TGAACGAAAA AGTGAGCACC
GCGCTCCGTA GTCTCGCTGT TCAGCATAAA GTAAGTGGCT TCAATGCGGT GATGGCACTT
GTAAAACTCT TATTGTATAA GCATACAGCA CAGCAGGATA TTGTGATTGG TTCACCGGTA
GCCGACCGCG CACACGCTGA CACAGACAAT CAGATCGGTG TCTATTTCAA TACGCTTCCA
TTACGTACCC GTTTCAGTGG AACCGACAAT TTTACACAGC TGTTGGGTAA AGTAGCAGAA
GTGACCCTCA GGGCATTTGA CCATGTTGAT TATCCATTCG AAAATGTACT GGAAGATATA
GATGCGGAGT TTGATAAACA GCGTAATTCC CTGTTTGATG TCGGCCTGAC CTACATTTCT
TTCATGAATG CCGCATCGGA TGCCGGAACG GCTGATCAGC AGGCGGAAGA CGCTACAATA
ACCGTAAAAG GAATCTATCC GGGATTTAAA TACATCAAAT CGGATCTATG GATCAAAGCG
GTGGAAAATG GGAATGAGCC CTTCGTATTC GTATTAGCAT ACAATACCGA CCTGTTCAAA
GCTTCCTTTG CAACAAAACT AATGGACGAC TTAAATGGTC TGGCCGCATT GGTTGTTGAG
CAGCCATCGG CTTCCCTCGA CACGCTGATC GCAAATGTAA AAACACAATC GGCCGAGGCT
GATGAACAAA AACAACAGCA TGTAAGGCAT CGCAACCTGG AAGTATTGAA GAATTTCCGT
GTAGGCGCAA GATGA
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| Protein sequence | MKYPLLHELF DNISSKYPSR TAVANGQQEV SYEALQQRSL QLAASLQDAG LEKETVVATL
LPAGADLAAT TIALFRTGLI YMPLDPRIPI IRVQNMLSIT GSKVIVTNKE LLDTARNIVK
GGPDSLQYVL VLDDVATQLF SVDKAGTLAP AAFPGNVAQN DTETDSCYIF FTSGTTGSGK
PILGSHQGLS QYIHWEIKEF GLNENCRVSQ LAQVTFDASL RDLFVPLCTG GTLCVLPADA
KFQMPVLIEW LKAQKVSLIH CVPSIFRLLT RELEQQPVGS VAFPDLKFIL MAGEMLYAKD
IAAWRRVAGT TTELVNLYGA SETTLVKTFH RISEIPEDGG EALHVGQPID QAFIAVMNGN
RLARIGEIGE IYIITHYTSK GYFADPVKTA ERFVKNPLEG SSVPLAYRTG DMGRYRKDRS
IEVLGRQDDQ LKINGIRVEL QELEQIILET AGIAQVVIKA IESPTGAMEL ACYYTGVAQD
ATKLRSVLKE KLSDSVLPAY FIHLKEFPLT LNGKVDKAAL IKPEYKDNTD AAGGSAVVAS
ASETIMEDIW RDVFKMKQIG RNASFFSIGG TSLKAIRVIS QVYKRFEVMI TINDLFANPT
IATLTGFVEK GSKKAFTAIR PVAKQDTYEV SAVQKRIWAI DQFSDNGALY NVPEFYLFEG
PLDTAAFEKA LAALVGRHEI LRTTFELING EPRQRIHDAA SWNVSLKLYD YSNEASPLDK
AIAFSTEAAL EPFDLQNGPL LRTTLLKTGK DEHLFVFVTH HIVSDAWSQE IIARDVLAFY
DAFNEGKQTA LEPLKIQYKD FAAWHNERLT SRSADHRAFW KAQFAEAAPK LKLPLDYPRP
AQQTFNAEEV SFRLNEKVST ALRSLAVQHK VSGFNAVMAL VKLLLYKHTA QQDIVIGSPV
ADRAHADTDN QIGVYFNTLP LRTRFSGTDN FTQLLGKVAE VTLRAFDHVD YPFENVLEDI
DAEFDKQRNS LFDVGLTYIS FMNAASDAGT ADQQAEDATI TVKGIYPGFK YIKSDLWIKA
VENGNEPFVF VLAYNTDLFK ASFATKLMDD LNGLAALVVE QPSASLDTLI ANVKTQSAEA
DEQKQQHVRH RNLEVLKNFR VGAR
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