| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3400 |
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| Symbol | |
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| ID | 8359566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4188962 |
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| End bp | 4192213 |
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| Gene Length | 3252 bp |
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| Protein Length | 1083 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965573 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003123068 |
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| Protein GI | 256422415 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.371233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA GAATCATTCA CAGCGTTTTT GAAGCAAAAG CGCAGTTATT CCCTGAACGT
ATAGCCGTAG AAGACCAGGA AAAAAAGGTC TCCTACAGGG AATTAAACCA GCTGGCAAAT
GATCTGGCAA CAACCCTGCG CCTGCAGGGT ATTGGTCGCG ACAGGATTGC CATGACCCTG
ATGGGTGCTG ACGCCAGACT GATTGCTGCC GTACTGGCTA TTTTTAAGGC CGGCGGTATC
TATCTGCCTG CCGATTTTAC CTTCCCCGCT AATCTAATGC AACAGGTGCT GGAAGAAGGT
AATCCCGATA TCGTGATCAC TTCAGTTGAA ATGCTGGAAG ATGCTAAGGC ACTGTTGTAT
ATGAATTATG CAACATTGCC GGTAATGATC GTTATGGACA AGGAGGGTGC TTTTTCTGTA
ACAGGTCAGC GCGATACACT GCCTGTACCT GCGGATACGG AAATCCGCCC GGAAGATGGC
TGTTATATCT TTTATACCTC CGGTTCAACC GGTAAAGCGA AAGCGATACT AGGTAACCAC
AAAGGTCTCA GCCACTTCAT TCACTGGGAG ATGAATGAGT TCGCCGTAAA TGAAAACTAC
CGGGTAAGCC AGTTGAGCCA ATTCACCTTT GATGCATCCC TGCGTGATAT ATTTCTGCCC
CTGGCAACAG GCGCCTGTAT CTGTATCCCG CCGGCTGGTA TTAAATCAAA TATCCCACTG
CTGATAGAGT GGCTGGAAGA AAAGAAGATT AACCTGGTAC ACTGTGTACC ATCCATCTTC
AGATTGATCA CCAGATGTCT GGATGATACC ACCGGCAAAC AGCTATTCCC TGATCTGAAA
CAGGTCTTAA TGGCAGGTGA ACGTTTGTAC AGTAAGGATA TCACCCAATG GAGGAATATC
GTTGGAGAGC ATGTGGAACT GGTGAACCTG TACGGTACTT CCGAAACAAC AATGGCCAAA
ACGTTCCATC GAATCAAGGA AACACCGGAA GATCCTTCCG CTGTGATACA TGTAGGCTGG
CCAATGAACA ATACTATGGT GGCTGTACTG AATGGCAACC GCCTCTGTTC GCCGGGTGAG
ATAGGAGAGA TCTATATCAA AACGCCGTTT ATGACAAACG GCTATTTTCG TAATGAAGCG
TTGACGAAAT CAGTATTTGT GCAGAACCCA CTGGTAAAAG ATCGCGTGGA TATTATGCAT
AAAACAGGCG ATATGGGCCG TTTCTTCGAA GATGGTCATA TTGAAGTCCA TGGTAGACTG
GACGACCAGG TAAAGATCAA TGGTATCCGC CTGGAACTTG GCGAAGTAAA GCAGGCCGTG
TTATCCGCTC CGGGCGTTCA GGATGCAGAA GTGATCGTGA TCCCTGATGC GTTTAATGAA
AATCAGCTGG CCTGTTATTA TGTGGGTGGC GAAGCGCAGA ATGAAAACCT ACGTACCTAC
TTGCAGGGAC AGTTACAAGC CGCATTTGTA CCGGCCTTTT TCATCTACAT GAAAGAATTA
CCATTGACCA TCAATGGCAA AGTAGATAAG AAAGCGTTAC CGAGACCGGT TATTGTTCCC
GCAGCTACAG GCGACGGGAT TGAAGAAACT GATCCGGCGA TATTGACAAT CATGAGTATC
TGGAGAGAAG TATTAGGGCT GCAGGAGATC AATAGAAATA CGCATTTTTT CTATTCAGCA
GGTACTTCGC TTAAAGCCAT TATGATCATC TCAAAACTTT ATCGTGCATT CAATGTCCGC
CTGAAGATCA GAGATGTCTT TGACAATGCA ACAGTGATCA GTCTGTATGA ACATATTAAA
AGCCTGCAGT GCAAAGCATT TGAATCACTG GAACTTGCGC CTGTAGCAGA TAACTATGCA
ACCACTTATG CGCAGAAAGG CATCTGGCTG CATCTGCAAT ACGGCAGAGG GCTGGCGGCT
TACAATATGA CCGGCGCCTA TCGTTTTGAA GGTGCTTTTA ATCAGGATGC ATTTATAAAA
TCATTGCACG TATTGGTACA ACGGTATGAA ATGCTACGTA CCACATTTGT CGTTGACAAA
GGGGAGCTGC GCCAGCAGAT ACATACATTT GATCCTGCCG CCATCAATAT CTCCTTTGAA
AAGTATGACA ATACACTGGA TCCGGAAGGA AAGGCAGTAG CAGAAGCGGA TTCACTCAAA
GTGTTTGATC CGCAGAAAGA ACCGCTGATC CGTTTCAGGT TATTGCAGCT GAATGAACGT
TCACACATAT TGGTATTGAC CCAGCATCAC CTGGTGGCAG ATGGCTGGTC GGTGAACCTC
CTGCTTAAAG AGTTCCTGGA GCTATTCGCT GCTTTCAGCC GGAATGATGT ACCGAAATTA
CCTTCCCTGA AACTACAATA TAAAGACTAT GCCGCCTGGC ATAATGCATA TATCAATAGT
CTCGCCGCAC AGCGTCACAA AGATTTCTGG AAGGCGCAGC TGGAAGGAGA CTTACAGCCG
CTTAAATTAT CGGCTGCCGG TTTTAACTCC ATCGGGAAAA GTTATGAAGG CCGGCTCTTT
ACATTCGATC TGCCGGCAAC ATTGAGTCGT ACAGTTTTTG ACTTGAGTAG TAGCAGAGGA
AAGAGCAGCT TTGCTATTTT GTTGACACTC ACCAACATTT TACTGTATAG CTATACCGGC
AGAGAAGATA TCCTGCTGGG CTCACCGTAT GCAGGTCGTA GTCATCCGGA CCTGGAAGAC
CAATTAGGTC TTTTTGTCAG CATTATTCTG TTAAGAAGCC AGCTGGAAGC CGGAGAGACT
TTCTCTCAAT TACTTGACGA AGTAGCTGCA AATGCAGCAG AAGCATATGA ACATGGTATC
TATCCGTTTG AAAAGATACT GGAGGAACTG GAGCTGACCA ACAACGGAAG CGGAATGCAG
TTCCTGAATG TATTTGTCCA AATGCAGGAG GCACATGAAG AAGCCCTGGA AACATACCAG
GAAGGGTTAC AGGATCTGCA TGTCATTCCG GTTGATTTCA AACACCAGTC AGCCAAATTT
GATCTCACGT TTAACTTCGC CGCAACACCT GCAAACGGCA GGATCAGCGT AGTAATAGAA
TACAATACCG CTTTATTTAC AGAAGCGCGT ATACGGCAGG TACAGGATGA CTTTATCCGC
TTGCTGGAAC AGGTGGCTGC TAATCCGGAG ACAACACTGG CTGCACTCAG CAACAGTGTA
CCGGTAGCTA TTAACGAAGA GATCAGCAAT ATCAGTCTGC AGATCAGTAA TGGTATCAGT
CGCGATTATT AA
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| Protein sequence | MDKRIIHSVF EAKAQLFPER IAVEDQEKKV SYRELNQLAN DLATTLRLQG IGRDRIAMTL
MGADARLIAA VLAIFKAGGI YLPADFTFPA NLMQQVLEEG NPDIVITSVE MLEDAKALLY
MNYATLPVMI VMDKEGAFSV TGQRDTLPVP ADTEIRPEDG CYIFYTSGST GKAKAILGNH
KGLSHFIHWE MNEFAVNENY RVSQLSQFTF DASLRDIFLP LATGACICIP PAGIKSNIPL
LIEWLEEKKI NLVHCVPSIF RLITRCLDDT TGKQLFPDLK QVLMAGERLY SKDITQWRNI
VGEHVELVNL YGTSETTMAK TFHRIKETPE DPSAVIHVGW PMNNTMVAVL NGNRLCSPGE
IGEIYIKTPF MTNGYFRNEA LTKSVFVQNP LVKDRVDIMH KTGDMGRFFE DGHIEVHGRL
DDQVKINGIR LELGEVKQAV LSAPGVQDAE VIVIPDAFNE NQLACYYVGG EAQNENLRTY
LQGQLQAAFV PAFFIYMKEL PLTINGKVDK KALPRPVIVP AATGDGIEET DPAILTIMSI
WREVLGLQEI NRNTHFFYSA GTSLKAIMII SKLYRAFNVR LKIRDVFDNA TVISLYEHIK
SLQCKAFESL ELAPVADNYA TTYAQKGIWL HLQYGRGLAA YNMTGAYRFE GAFNQDAFIK
SLHVLVQRYE MLRTTFVVDK GELRQQIHTF DPAAINISFE KYDNTLDPEG KAVAEADSLK
VFDPQKEPLI RFRLLQLNER SHILVLTQHH LVADGWSVNL LLKEFLELFA AFSRNDVPKL
PSLKLQYKDY AAWHNAYINS LAAQRHKDFW KAQLEGDLQP LKLSAAGFNS IGKSYEGRLF
TFDLPATLSR TVFDLSSSRG KSSFAILLTL TNILLYSYTG REDILLGSPY AGRSHPDLED
QLGLFVSIIL LRSQLEAGET FSQLLDEVAA NAAEAYEHGI YPFEKILEEL ELTNNGSGMQ
FLNVFVQMQE AHEEALETYQ EGLQDLHVIP VDFKHQSAKF DLTFNFAATP ANGRISVVIE
YNTALFTEAR IRQVQDDFIR LLEQVAANPE TTLAALSNSV PVAINEEISN ISLQISNGIS
RDY
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