Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3325 |
Symbol | |
ID | 8359491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4089273 |
End bp | 4089809 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965498 |
Product | YceI family protein |
Protein accession | YP_003122993 |
Protein GI | 256422340 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000106411 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAT TAGTAATATT TTCATCAACA CTGCTGCTCA CAGCAGCAGT GTTTGCCTTC GCCGCACTGG CACAGGCATG GAACATCAGT GGCAAGTATA ATATTGCCTT CTCTACAAAT GAAGCAAGCG GTATCTTCAA AACCTTTAAA GGTACTATCG CTTTCGACGA AGCCAATCTG GCTGCTTCTA ACTTCAGTGT ATCTGTTGAT GTTGCTTCTA TCAACACCGG TAATGCACTG ATGAACAAAC ACGCTAAAAG CGACGAGTGG TTTGATGCAG CGAAATATCC TGAAATCAAA TACACCTCCA AAAAGATCGT AAAAGCAGGT GCTGGCTACC AGGTAACCGG CGACCTTGAA ATACATGGTG TTAAGAAGGA ATTCACCATT CCTTTCACTT TCAAACGCGC AGGTAACGGC GCAACCTTCG ATGGTACATT CAAAGTAAAT CGTAACGATT TTCATATCGG TAAACCAGGT GGCGACGTAG CTGACATGGT CAACGTAACA ATAGCCGTTC CTGTTGTAAA GGGCTAA
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Protein sequence | MKRLVIFSST LLLTAAVFAF AALAQAWNIS GKYNIAFSTN EASGIFKTFK GTIAFDEANL AASNFSVSVD VASINTGNAL MNKHAKSDEW FDAAKYPEIK YTSKKIVKAG AGYQVTGDLE IHGVKKEFTI PFTFKRAGNG ATFDGTFKVN RNDFHIGKPG GDVADMVNVT IAVPVVKG
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