Gene Cpin_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3325 
Symbol 
ID8359491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4089273 
End bp4089809 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content44% 
IMG OID644965498 
ProductYceI family protein 
Protein accessionYP_003122993 
Protein GI256422340 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000106411 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGAT TAGTAATATT TTCATCAACA CTGCTGCTCA CAGCAGCAGT GTTTGCCTTC 
GCCGCACTGG CACAGGCATG GAACATCAGT GGCAAGTATA ATATTGCCTT CTCTACAAAT
GAAGCAAGCG GTATCTTCAA AACCTTTAAA GGTACTATCG CTTTCGACGA AGCCAATCTG
GCTGCTTCTA ACTTCAGTGT ATCTGTTGAT GTTGCTTCTA TCAACACCGG TAATGCACTG
ATGAACAAAC ACGCTAAAAG CGACGAGTGG TTTGATGCAG CGAAATATCC TGAAATCAAA
TACACCTCCA AAAAGATCGT AAAAGCAGGT GCTGGCTACC AGGTAACCGG CGACCTTGAA
ATACATGGTG TTAAGAAGGA ATTCACCATT CCTTTCACTT TCAAACGCGC AGGTAACGGC
GCAACCTTCG ATGGTACATT CAAAGTAAAT CGTAACGATT TTCATATCGG TAAACCAGGT
GGCGACGTAG CTGACATGGT CAACGTAACA ATAGCCGTTC CTGTTGTAAA GGGCTAA
 
Protein sequence
MKRLVIFSST LLLTAAVFAF AALAQAWNIS GKYNIAFSTN EASGIFKTFK GTIAFDEANL 
AASNFSVSVD VASINTGNAL MNKHAKSDEW FDAAKYPEIK YTSKKIVKAG AGYQVTGDLE
IHGVKKEFTI PFTFKRAGNG ATFDGTFKVN RNDFHIGKPG GDVADMVNVT IAVPVVKG